Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q01N77

- Q01N77_SOLUE

UniProt

Q01N77 - Q01N77_SOLUE

Protein
Submitted name:

RNA polymerase, sigma-24 subunit, ECF subfamily

Gene

Acid_3603

Organism
Solibacter usitatus (strain Ellin6076)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (14 Nov 2006)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro
    3. sigma factor activity Source: UniProtKB-KW

    GO - Biological processi

    1. DNA-templated transcription, initiation Source: InterPro

    Keywords - Molecular functioni

    Sigma factorSAAS annotation

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-bindingSAAS annotation

    Enzyme and pathway databases

    BioCyciSUSI234267:GHSK-3634-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    RNA polymerase, sigma-24 subunit, ECF subfamilyImported
    Gene namesi
    Ordered Locus Names:Acid_3603Imported
    OrganismiSolibacter usitatus (strain Ellin6076)Imported
    Taxonomic identifieri234267 [NCBI]
    Taxonomic lineageiBacteriaAcidobacteriaSolibacteresSolibacteralesSolibacteraceaeCandidatus Solibacter
    ProteomesiUP000000671: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi234267.Acid_3603.

    Structurei

    3D structure databases

    ProteinModelPortaliQ01N77.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1595.
    HOGENOMiHOG000220478.
    KOiK03088.
    OMAiRTHVREA.
    OrthoDBiEOG6WT8FT.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR014284. RNA_pol_sigma-70_dom.
    IPR007627. RNA_pol_sigma70_r2.
    IPR013249. RNA_pol_sigma70_r4_t2.
    IPR013325. RNA_pol_sigma_r2.
    IPR013324. RNA_pol_sigma_r3_r4.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF04542. Sigma70_r2. 1 hit.
    PF08281. Sigma70_r4_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF88659. SSF88659. 1 hit.
    SSF88946. SSF88946. 1 hit.
    TIGRFAMsiTIGR02937. sigma70-ECF. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q01N77-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSNPAASFEP YRRRLLGLAY RMLGSMADGE DAVQETYLRW HAADRGKVSD    50
    PRAFLMTTTA RICLDMLTSA RARREEYVGP WLPEPVVDTA TLAPDSRTEL 100
    AEDLSIALLL TLDRLSPLER AAFLLHDVFD FSFTEVAATL ERSEAACRQL 150
    AARARSHVRE IRPRGAVAAP PRSAEIDARH EQLMLAFVAA TRSGDLNALT 200
    NLLAGDVRIV TDGGGKVAAA LNVLEGADRA ARFLVGATRK GWRDDFTLRF 250
    ATINGLPGVI LDGPEGPVQT TAFQIEDAVI RALYVVRNPD KLRHLSAG 298
    Length:298
    Mass (Da):32,562
    Last modified:November 14, 2006 - v1
    Checksum:i1DC19FCC917FC893
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000473 Genomic DNA. Translation: ABJ84575.1.
    RefSeqiYP_824860.1. NC_008536.1.

    Genome annotation databases

    EnsemblBacteriaiABJ84575; ABJ84575; Acid_3603.
    GeneIDi4428209.
    KEGGisus:Acid_3603.
    PATRICi32009604. VBICanSol30224_3770.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000473 Genomic DNA. Translation: ABJ84575.1 .
    RefSeqi YP_824860.1. NC_008536.1.

    3D structure databases

    ProteinModelPortali Q01N77.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 234267.Acid_3603.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ84575 ; ABJ84575 ; Acid_3603 .
    GeneIDi 4428209.
    KEGGi sus:Acid_3603.
    PATRICi 32009604. VBICanSol30224_3770.

    Phylogenomic databases

    eggNOGi COG1595.
    HOGENOMi HOG000220478.
    KOi K03088.
    OMAi RTHVREA.
    OrthoDBi EOG6WT8FT.

    Enzyme and pathway databases

    BioCyci SUSI234267:GHSK-3634-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR014284. RNA_pol_sigma-70_dom.
    IPR007627. RNA_pol_sigma70_r2.
    IPR013249. RNA_pol_sigma70_r4_t2.
    IPR013325. RNA_pol_sigma_r2.
    IPR013324. RNA_pol_sigma_r3_r4.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF04542. Sigma70_r2. 1 hit.
    PF08281. Sigma70_r4_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88659. SSF88659. 1 hit.
    SSF88946. SSF88946. 1 hit.
    TIGRFAMsi TIGR02937. sigma70-ECF. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ellin6076Imported.

    Entry informationi

    Entry nameiQ01N77_SOLUE
    AccessioniPrimary (citable) accession number: Q01N77
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3