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Q01J85 (Q01J85_ORYSA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:OSIGBa0152K17.2 EMBL CAH67190.1
OrganismOryza sativa (Rice) EMBL CAH67190.1
Taxonomic identifier4530 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q01J85 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 2A9ADCAA22D55CC7

FASTA48454,425
        10         20         30         40         50         60 
MALSTAQTGE SMHSSTFASR YVRTALPRFR MPEKSIPKDA AYQIINDELM LDGNPRLNLA 

        70         80         90        100        110        120 
SFVTTWMEPE CDKLMMAAIN KNYVDMDEYP VTTELQNRCV NMIAHLFNAP IGDDETAVGV 

       130        140        150        160        170        180 
GTVGSSEAIM LAGLAFKRKW QNRMKAEGKP HDKPNIVTGA NVQVCWEKFA RYFEVELKEV 

       190        200        210        220        230        240 
KLTQGYYVMN PEKAVEMVDE NTICVAAILG STLNGEFEDV KMLNDLLTAK NAETGWNTPI 

       250        260        270        280        290        300 
HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGVGWVIWR NKEDLPDELI 

       310        320        330        340        350        360 
FHINYLGADQ PTFTLNFSKG SNQIIAQYYQ LIRLGFEGYK DIMQNCRDNA TVLREGIEKT 

       370        380        390        400        410        420 
GHFDVVSKDS GVPLVAFSLK DSSRYTVFEV AESLRRFGWI VPAYTMPADA EHVAVMRVVI 

       430        440        450        460        470        480 
REDFSRGLAE RLITDLTKTV ADMDAHAVKK AAAEPAKKTV REIEKEVTTY WRSFVARKKS 


SLVC 

« Hide

References

[1]"Sequence and analysis of rice chromosome 4."
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. expand/collapse author list , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.
Nature 420:316-320(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Chromosome-wide comparison between domesticated rice subspecies indica and japonica."
Han B.
Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR855179 Genomic DNA. Translation: CAH67190.1.

3D structure databases

ProteinModelPortalQ01J85.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os04g37460.1.

Proteomic databases

PRIDEQ01J85.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneQ01J85.

Gene expression databases

GenevestigatorQ01J85.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ01J85_ORYSA
AccessionPrimary (citable) accession number: Q01J85
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)