Q01DY7 (Q01DY7_OSTTA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase (ISS) EMBL CAL52466.1

Gene names

Ordered Locus Names:

Ot02g05910 EMBL CAL52466.1

Organism

Ostreococcus tauri [Complete proteome] EMBL CAL52466.1

Taxonomic identifier

70448 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Chlorophyta › Mamiellophyceae › Mamiellales › Ostreococcus

Protein attributes

Sequence length	395 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CAL52466.1

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAL52466.1
	Non-terminal residue	395	1	EMBL CAL52466.1

Sequences

	Sequence		Length	Mass (Da)
	Q01DY7 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 68A29CE8D4D3EBEB	FASTA	395	43,561
	10 20 30 40 50 60 AMNSNVHTYE VAPVFTEIER SMLAKVATLW LGENADGTTP NHDGLFVPGG SIANLYSIIL 70 80 90 100 110 120 ARERVCPEAK KTGMPPGYVA FCSEQSHYSY KKCAHMVGLG MDNMIKVDCG PNGAMLPEAL 130 140 150 160 170 180 ERAVAEAIAA GKKPFYVGAT AGTTVLGAYD PYDALADLCE RNNMWLHVDG AWGGAAILSK 190 200 210 220 230 240 RHKHLMKGAE RADSFCWNPH KLLGIPLQCS IVLSKHAGSF MAANSYKADY LFQPDKLDSE 250 260 270 280 290 300 ADLGDRTIQC GRKSDALKLW LAWKYRGDAG WERLVDHSFA LAKFVETEVV SDQTGAWALA 310 320 330 340 350 360 APAQCANVGF WYVPKRLRPF NKETATPKQM KELAKVAPKL KDRMQRAGLA MIGFQPVPAF 370 380 390 GLQNFFRLVL PNPRHNSESK LRELMHQMDK LGEDL

References

[1]

"Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features." Derelle E., Ferraz C., Rombauts S., Rouze P., Worden A.Z., Robbens S., Partensky F., Degroeve S., Echeynie S., Cooke R., Saeys Y., Wuyts J., Jabbari K., Bowler C., Panaud O., Piegu B., Ball S.G., Ral J.-P. , Bouget F.-Y., Piganeau G., De Baets B., Picard A., Delseny M., Demaille J., Van de Peer Y., Moreau H. Proc. Natl. Acad. Sci. U.S.A. 103:11647-11652(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OTTH0595.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAID01000002 Genomic DNA. Translation: CAL52466.1.
RefSeq	XP_003075194.1. XM_003075146.1.
3D structure databases
ProteinModelPortal	Q01DY7.
ModBase	Search...
Protein-protein interaction databases
STRING	70448.Q01DY7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	9837226.
KEGG	ota:Ot02g05910.
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000005382.
KO	K01580.
OMA	LARERVC.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR021115. Pyridoxal-P_BS. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q01DY7_OSTTA

Accession

Primary (citable) accession number: Q01DY7

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)