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Q01C49 (Q01C49_OSTTA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Ot03g04540 EMBL CAL53105.1
OrganismOstreococcus tauri [Complete proteome] EMBL CAL53105.1
Taxonomic identifier70448 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeChlorophytaMamiellophyceaeMamiellalesOstreococcus

Protein attributes

Sequence length1324 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 zinc ion per subunit By similarity. PIRSR PIRSR000381-1

Cobalamin By similarity.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CAL53105.1

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region924 – 9252Cobalamin-binding By similarity PIRSR PIRSR000381-2
Region1287 – 12882S-adenosyl-L-methionine binding By similarity PIRSR PIRSR000381-2

Sites

Metal binding3221Zinc By similarity
Metal binding3851Zinc By similarity
Metal binding3861Zinc By similarity
Metal binding8491Cobalt (cobalamin axial ligand) By similarity
Binding site10381S-adenosyl-L-methionine By similarity PIRSR PIRSR000381-2
Binding site12321S-adenosyl-L-methionine; via carbonyl oxygen By similarity PIRSR PIRSR000381-2
Binding site12361Cobalamin; via carbonyl oxygen By similarity PIRSR PIRSR000381-2

Experimental info

Non-terminal residue13241 EMBL CAL53105.1

Sequences

Sequence LengthMass (Da)Tools
Q01C49 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 5A01F66A6FAB5326

FASTA1,324145,764
        10         20         30         40         50         60 
XXADATERML EFAATLDPKS KPTQLRRLGA EPPAPKFEAQ PKQNYSSENK IAPKKASELL 

        70         80         90        100        110        120 
PVPTYKEFVD PMKKSPAFDV IEGIMAKRVM VIDGAMGTAV QRYKLTEDDF RGERYKEHTH 

       130        140        150        160        170        180 
DLKGNNDILV LTRPDVIGEI HEAYLAAGAD IIETNTFSST MIAQADYELD KKNEVRDMNI 

       190        200        210        220        230        240 
AAARLAKAAC EKFTKQNPDK PRFAAGAIGP TNRTLSVSPS VENPAFRACT FDEIVDGYYD 

       250        260        270        280        290        300 
QIEALVEGGV DMLLVETIFD TLNAKAAIFA IEKFFDAYGT RLPLFVSGTI VDNSGRTLSG 

       310        320        330        340        350        360 
QTNEAFWNSV MHAKPMAIGL NCALGAKDMV PYIENLSKCA DCWVFAYPNA GLPNAMGGYD 

       370        380        390        400        410        420 
QKGAEMAEDC RVFLEKGLLN GIGGCCGTTD EHIGALADMV APYTPRKKHG IPDIMRLSGL 

       430        440        450        460        470        480 
EPFNYSPDEK DYRKTFINLG ERCNVAGSTI FKKAIVDGDF EKALAIALKQ VENGAHVIDI 

       490        500        510        520        530        540 
NMDDGLIDGE SAMTRFVNLL VSEPDASKVP FMIDSSKFHV VEAGLKCSQG KCIMNSISLK 

       550        560        570        580        590        600 
GGEEEFLKHA RIVKRHGAAV VVMAFDEAGQ AATEAEKIRI CCRAYKLLVE EVGFNPQDII 

       610        620        630        640        650        660 
FDPNILTIGT GMEEHNNYAV DFINATREIK RLCPGCKISG GVSNLAFSFR GNEPVRRAFH 

       670        680        690        700        710        720 
SAFLYHACKA GMDMGIVNAA QELLEYVEDV LLNRCTNATE RMLEFAATLD PKSKPTELRK 

       730        740        750        760        770        780 
KGVAATSKKT AGSGKEWRNQ PAEKRLEYAL IKGIDEFCIA DTEECRIGGK YSSCLEVIEG 

       790        800        810        820        830        840 
PLMDGMNIVG DLFGAGKMFL PQVIKSARVM KKAVGHLIPF MDAEKAATGS TEASTAGTFL 

       850        860        870        880        890        900 
IATVKGDVHD IGKNIVAVVL GCNNFKVVDI GVMCPCEKIL DAVVEHKADI LGLSGLITPS 

       910        920        930        940        950        960 
LDEMVTVAKE MEKRGMKLPL LIGGATTSKM HTAVKLTPNY SGGVIHVLDA SRAVPVAQTL 

       970        980        990       1000       1010       1020 
LDDRKNVDFL DDINETYAEM REEFYAGLED RKYLTLEKAR ATVQPVDFTV APNIPVTPKF 

      1030       1040       1050       1060       1070       1080 
CGAKSVEVSI DDVLPYIDWN PFFQVWQLRG RYPNRGYPKI FNDETVGSEA KKLFNEANAM 

      1090       1100       1110       1120       1130       1140 
IQKIKENKRL TLKGIYGFYP ANSVGDDIVV YTDETRSTPQ HTFFTLRQQA EKDTDEPYMA 

      1150       1160       1170       1180       1190       1200 
LSDFIAPKSS GVKDYLGMFV CSAGFGLDEL TAEYKAANDD YSYIMAEALA DRLAEAFAEL 

      1210       1220       1230       1240       1250       1260 
LHEQVRKDHW GYAKDEAFSC DDLLKVKYQG IRPAPGYPSQ PDHTEKATMW DLMKVKEEIG 

      1270       1280       1290       1300       1310       1320 
VELTETFAML PSASVSGLYF AGACSQYFNV GKITADQVTE YADRKKMDLS EAQRWLGPNL 


SYEP 

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References

[1]"Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features."
Derelle E., Ferraz C., Rombauts S., Rouze P., Worden A.Z., Robbens S., Partensky F., Degroeve S., Echeynie S., Cooke R., Saeys Y., Wuyts J., Jabbari K., Bowler C., Panaud O., Piegu B., Ball S.G., Ral J.-P. expand/collapse author list , Bouget F.-Y., Piganeau G., De Baets B., Picard A., Delseny M., Demaille J., Van de Peer Y., Moreau H.
Proc. Natl. Acad. Sci. U.S.A. 103:11647-11652(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OTTH0595.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CAID01000003 Genomic DNA. Translation: CAL53105.1.
RefSeqXP_003078364.1. XM_003078316.1.

3D structure databases

ProteinModelPortalQ01C49.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING70448.Q01C49.

Proteomic databases

PRIDEQ01C49.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9833122.
KEGGota:Ot03g04540.

Phylogenomic databases

eggNOGCOG1410.
HOGENOMHOG000251409.
KOK00548.
OMASMKEGEA.

Family and domain databases

Gene3D1.10.1240.10. 1 hit.
3.10.196.10. 1 hit.
3.20.20.20. 1 hit.
3.20.20.330. 1 hit.
3.40.50.280. 1 hit.
InterProIPR003759. Cbl-bd_cap.
IPR006158. Cobalamin-bd.
IPR011005. Dihydropteroate_synth-like.
IPR011822. MetH.
IPR000489. Pterin-binding.
IPR003726. S_MeTrfase.
IPR004223. VitB12-dep_Met_synth_activ_dom.
[Graphical view]
PfamPF02310. B12-binding. 1 hit.
PF02607. B12-binding_2. 1 hit.
PF02965. Met_synt_B12. 1 hit.
PF00809. Pterin_bind. 1 hit.
PF02574. S-methyl_trans. 1 hit.
[Graphical view]
PIRSFPIRSF000381. MetH. 1 hit.
SMARTSM01018. B12-binding_2. 1 hit.
[Graphical view]
SUPFAMSSF47644. SSF47644. 1 hit.
SSF51717. SSF51717. 1 hit.
SSF52242. SSF52242. 1 hit.
SSF56507. SSF56507. 1 hit.
SSF82282. SSF82282. 1 hit.
TIGRFAMsTIGR02082. metH. 1 hit.
PROSITEPS50974. ADOMET_ACTIVATION. 1 hit.
PS51332. B12_BINDING. 1 hit.
PS51337. B12_BINDING_NTER. 1 hit.
PS50970. HCY. 1 hit.
PS50972. PTERIN_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ01C49_OSTTA
AccessionPrimary (citable) accession number: Q01C49
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: April 16, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)