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Q01950

- PYC1_SYNY3

UniProt

Q01950 - PYC1_SYNY3

Protein

Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core

Gene

apcC

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer By similarity.By similarity

    GO - Biological processi

    1. photosynthesis Source: UniProtKB-KW

    Keywords - Biological processi

    Photosynthesis

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core
    Alternative name(s):
    LC 7.8
    Gene namesi
    Name:apcC
    Ordered Locus Names:ssr3383
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cellular thylakoid membrane By similarity; Peripheral membrane protein By similarity; Cytoplasmic side By similarity
    Note: This protein occurs in the rod, it is associated with allophycocyanin.By similarity

    GO - Cellular componenti

    1. phycobilisome Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane, Phycobilisome, Thylakoid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 6767Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, corePRO_0000199240Add
    BLAST

    Proteomic databases

    PaxDbiQ01950.

    Interactioni

    Protein-protein interaction databases

    IntActiQ01950. 1 interaction.
    STRINGi1148.ssr3383.

    Structurei

    3D structure databases

    ProteinModelPortaliQ01950.
    SMRiQ01950. Positions 2-67.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini1 – 5656CpcD-likePROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 cpcD-like domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiNOG14273.
    HOGENOMiHOG000246920.
    KOiK02094.
    OMAiPYDSWFA.
    OrthoDBiEOG65XN69.

    Family and domain databases

    Gene3Di3.30.1490.170. 1 hit.
    InterProiIPR011134. Allophyco_linker.
    IPR011064. Allophyco_linker_chain.
    IPR008213. CpcD-like_dom.
    [Graphical view]
    PfamiPF01383. CpcD. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000083. Allophyco_linker. 1 hit.
    SMARTiSM01094. CpcD. 1 hit.
    [Graphical view]
    SUPFAMiSSF54580. SSF54580. 1 hit.
    PROSITEiPS51441. CPCD_LIKE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q01950-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRMFRITACV PSQTRIRTQR ELQNTYFTKL VPYDNSFREQ QRIMKMGGKI   50
    VKVELATGRP GTNAGLA 67
    Length:67
    Mass (Da):7,706
    Last modified:April 1, 1993 - v1
    Checksum:i39BE0BB8B6457F79
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M77135 Genomic DNA. Translation: AAA27278.1.
    BA000022 Genomic DNA. Translation: BAA17876.1.
    RefSeqiNP_441196.1. NC_000911.1.
    YP_005651253.1. NC_017277.1.
    YP_007451078.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA17876; BAA17876; BAA17876.
    GeneIDi954532.
    KEGGisyn:ssr3383.
    syy:SYNGTS_1300.
    syz:MYO_113120.
    PATRICi23839715. VBISynSp132158_1419.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M77135 Genomic DNA. Translation: AAA27278.1 .
    BA000022 Genomic DNA. Translation: BAA17876.1 .
    RefSeqi NP_441196.1. NC_000911.1.
    YP_005651253.1. NC_017277.1.
    YP_007451078.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali Q01950.
    SMRi Q01950. Positions 2-67.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q01950. 1 interaction.
    STRINGi 1148.ssr3383.

    Proteomic databases

    PaxDbi Q01950.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA17876 ; BAA17876 ; BAA17876 .
    GeneIDi 954532.
    KEGGi syn:ssr3383.
    syy:SYNGTS_1300.
    syz:MYO_113120.
    PATRICi 23839715. VBISynSp132158_1419.

    Phylogenomic databases

    eggNOGi NOG14273.
    HOGENOMi HOG000246920.
    KOi K02094.
    OMAi PYDSWFA.
    OrthoDBi EOG65XN69.

    Family and domain databases

    Gene3Di 3.30.1490.170. 1 hit.
    InterProi IPR011134. Allophyco_linker.
    IPR011064. Allophyco_linker_chain.
    IPR008213. CpcD-like_dom.
    [Graphical view ]
    Pfami PF01383. CpcD. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000083. Allophyco_linker. 1 hit.
    SMARTi SM01094. CpcD. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54580. SSF54580. 1 hit.
    PROSITEi PS51441. CPCD_LIKE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Excitation energy transfer from phycocyanin to chlorophyll in an apcA-defective mutant of Synechocystis sp. PCC 6803."
      Su X., Goodman P., Bogorad L.
      J. Biol. Chem. 267:22944-22950(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiPYC1_SYNY3
    AccessioniPrimary (citable) accession number: Q01950
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 1, 1993
    Last sequence update: April 1, 1993
    Last modified: October 1, 2014
    This is version 85 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3