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Q01909 (ATPG2_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 94. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ATP synthase gamma chain 2, chloroplastic
Alternative name(s):
F-ATPase gamma subunit 2
Gene names
Name:ATPC2
Ordered Locus Names:At1g15700
ORF Names:F7H2.4
OrganismArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length386 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF0 complex.

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has four main subunits: a, b, b' and c By similarity.

Subcellular location

Plastid › chloroplast thylakoid membrane; Peripheral membrane protein By similarity.

Induction

By light.

Sequence similarities

Belongs to the ATPase gamma chain family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 6060Chloroplast By similarity
Chain61 – 386326ATP synthase gamma chain 2, chloroplastic
PRO_0000002675

Sites

Active site1491 By similarity

Amino acid modifications

Disulfide bond260 ↔ 266 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q01909 [UniParc].

Last modified February 1, 1994. Version 1.
Checksum: 2EDCE2F47EBCAC3A

FASTA38642,679
        10         20         30         40         50         60 
MTGSISTSWL LSSPSNSNSA SSSESYSFIA TLKPVRYYPF QSLTPNRISS RSPLPSIQIR 

        70         80         90        100        110        120 
AGIRELRERI DSVKNTQKIT EAMRLVAAAR VRRAQDAVIK GRPFTETLVE ILYSINQSAQ 

       130        140        150        160        170        180 
LEDIDFPLSI VRPVKRVALV VVTGDKGLCG GFNNAVTKKA TLRVQELKQR GIDCVVISVG 

       190        200        210        220        230        240 
KKGNAYFSRR DEFDVDKCIE GGGVFPTTKE AQVIADDVFS LFVSEEVDKV ELVYTKFVSL 

       250        260        270        280        290        300 
VKSDPVIHTL LPLSMKGESC DVKGECVDAI EDEMFRLTSK DGKLAVERTK LEVEKPEISP 

       310        320        330        340        350        360 
LMQFEQDPVQ ILDAMMPLYL NSQILRALQE SLASELASRM NAMSNATDNA VELKKNLTMA 

       370        380 
YNRARQAKIT GELLEIVAGA EALRES

« Hide

References

« Hide 'large scale' references
[1]"Two genes, atpC1 and atpC2, for the gamma subunit of Arabidopsis thaliana chloroplast ATP synthase."
Inohara N., Iwamoto A., Moriyama Y., Shimomura S., Maeda M., Futai M.
J. Biol. Chem. 266:7333-7338(1991) [PubMed: 1826905] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[4]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed: 14593172] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		M61742 Genomic DNA. Translation: AAA32833.1.
AC034256 Genomic DNA. Translation: AAF82140.1.
CP002684 Genomic DNA. Translation: AEE29351.1.
AY065255 mRNA. Translation: AAL38731.1.
AY117311 mRNA. Translation: AAM51386.1.
IPIIPI00528606.
PIRA39732.
RefSeqNP_173022.1. NM_101438.2.
UniGeneAt.21942.
At.66944.

3D structure databases

ProteinModelPortalQ01909.
SMRQ01909. Positions 61-382.
ModBaseSearch...

Protein-protein interaction databases

IntActQ01909. 1 interaction.
STRINGQ01909.

Proteomic databases

PRIDEQ01909.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G15700.1; AT1G15700.1; AT1G15700.
GeneID838139.
GenomeReviewsGene locus AT1G15700 in contig CT485782_GR.
KEGGath:AT1G15700.
NMPDRfig|3702.1.peg.1876.

Organism-specific databases

TAIRAt1g15700.

Phylogenomic databases

eggNOGKOG1531.
GeneTreeEPGT00070000030078.
HOGENOMHBG586593.
InParanoidQ01909.
OMAMDTATNN.
PhylomeDBQ01909.
ProtClustDBCLSN2679503.

Gene expression databases

ArrayExpressQ01909.
GenevestigatorQ01909.
GermOnlineAT1G15700. Arabidopsis thaliana.

Family and domain databases

InterProIPR000131. ATPase_F1-cplx_gsu.
IPR023632. ATPase_F1_gsu_CS.
IPR023633. ATPase_F1_gsu_dom.
[Graphical view]
KOK02115.
PANTHERPTHR11693. ATPase_F1_gamma. 1 hit.
PfamPF00231. ATP-synt. 1 hit.
[Graphical view]
PRINTSPR00126. ATPASEGAMMA.
SUPFAMSSF52943. ATPase_gamma. 1 hit.
TIGRFAMsTIGR01146. ATPsyn_F1gamma. 1 hit.
PROSITEPS00153. ATPASE_GAMMA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPG2_ARATH
AccessionPrimary (citable) accession number: Q01909
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: December 14, 2011
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents