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Protein

Uncharacterized protein ssr2439

Gene

ssr2439

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

May have a regulatory function.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein ssr2439
Gene namesi
Ordered Locus Names:ssr2439
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9797Uncharacterized protein ssr2439PRO_0000157900Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiQ01904. 2 interactions.
STRINGi1148.ssr2439.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG77257.
OrthoDBiEOG6GJBXK.

Family and domain databases

InterProiIPR018449. NIL_domain.
[Graphical view]
PfamiPF09383. NIL. 1 hit.
[Graphical view]
SMARTiSM00930. NIL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q01904-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQAQTFSHLH SQSSQRTTEV TLYLTIPESY RQEPIVTQLV SRYQLQVNIL
60 70 80 90
AATLGTNGGQ GQFKLTLIGH AQAINNALAY LEQLQVTIVL DQESDGW
Length:97
Mass (Da):10,816
Last modified:October 31, 1997 - v2
Checksum:i9F7AE8959F3693C5
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti68 – 681I → M in CAA48110 (PubMed:8425067).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X67911 Genomic DNA. Translation: CAA48110.1.
BA000022 Genomic DNA. Translation: BAA18652.1.
PIRiS31094.
RefSeqiNP_442840.1. NC_000911.1.
YP_005652901.1. NC_017277.1.
YP_007452716.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA18652; BAA18652; BAA18652.
KEGGisyn:ssr2439.
PATRICi23843458. VBISynSp132158_3264.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X67911 Genomic DNA. Translation: CAA48110.1.
BA000022 Genomic DNA. Translation: BAA18652.1.
PIRiS31094.
RefSeqiNP_442840.1. NC_000911.1.
YP_005652901.1. NC_017277.1.
YP_007452716.1. NC_020286.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ01904. 2 interactions.
STRINGi1148.ssr2439.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18652; BAA18652; BAA18652.
KEGGisyn:ssr2439.
PATRICi23843458. VBISynSp132158_3264.

Phylogenomic databases

eggNOGiNOG77257.
OrthoDBiEOG6GJBXK.

Family and domain databases

InterProiIPR018449. NIL_domain.
[Graphical view]
PfamiPF09383. NIL. 1 hit.
[Graphical view]
SMARTiSM00930. NIL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence and homology comparison of two genes of the sulfate transport operon from the cyanobacterium Synechocystis sp. PCC 6803."
    Kohn C., Schumann J.
    Plant Mol. Biol. 21:409-412(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY2439_SYNY3
AccessioniPrimary (citable) accession number: Q01904
Secondary accession number(s): P74546
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 31, 1993
Last sequence update: October 31, 1997
Last modified: March 31, 2015
This is version 78 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.