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Protein

Lipoprotein OutS

Gene

outS

Organism
Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Out proteins are required for the translocation of pectate lyases and cellulases across the outer membrane.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

BioCyciDDAD198628:GHFQ-3244-MONOMER.

Protein family/group databases

TCDBi8.A.2.1.2. the secretin auxiliary lipoprotein (sal) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Lipoprotein OutS
Gene namesi
Name:outS
Ordered Locus Names:Dda3937_02411
OrganismiDickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937))
Taxonomic identifieri198628 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
Proteomesi
  • UP000006859 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane Curated; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020CuratedAdd
BLAST
Chaini21 – 133113Lipoprotein OutSPRO_0000018184Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi21 – 211N-palmitoyl cysteineCurated
Lipidationi21 – 211S-diacylglycerol cysteineCurated

Keywords - PTMi

Lipoprotein, Palmitate

Interactioni

Protein-protein interaction databases

STRINGi198628.Dda3937_02411.

Structurei

Secondary structure

1
133
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi40 – 6021Combined sources
Helixi69 – 8214Combined sources
Helixi87 – 893Combined sources
Helixi94 – 10613Combined sources
Helixi111 – 12111Combined sources
Helixi123 – 1319Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3UTKX-ray1.65A/B1-133[»]
4K0UX-ray2.15A28-133[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To K.pneumoniae PulS.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105XQF. Bacteria.
ENOG41122AR. LUCA.
HOGENOMiHOG000063150.
KOiK02465.
OMAiKCNRSDL.

Family and domain databases

InterProiIPR005699. Chap_lipoprot_PulS/OutS.
IPR019114. Chap_lipoprot_PulS/OutS-like.
[Graphical view]
PfamiPF09691. T2SS_PulS_OutS. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01004. PulS_OutS. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q01567-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHVSSLKVVL FGVCCLSLAA CQTPAPVKNT ASRSAASVPA NEQISQLASL
60 70 80 90 100
VAASKYLRVQ CERSDLPDDG TILKTAVNVA VQKGWDTGRY QSLPQLSENL
110 120 130
YQGLLKDGTP KATQCSSFNR TMTPFLDAMR TVR
Length:133
Mass (Da):14,334
Last modified:December 15, 1998 - v2
Checksum:i5948CEAEA124E9CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X65265 Genomic DNA. Translation: CAA46372.1.
CP002038 Genomic DNA. Translation: ADM99380.1.
PIRiS28011.
RefSeqiWP_013318814.1. NC_014500.1.

Genome annotation databases

EnsemblBacteriaiADM99380; ADM99380; Dda3937_02411.
GeneIDi9734629.
KEGGiddd:Dda3937_02411.
PATRICi42318653. VBIDicDad25310_3141.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X65265 Genomic DNA. Translation: CAA46372.1.
CP002038 Genomic DNA. Translation: ADM99380.1.
PIRiS28011.
RefSeqiWP_013318814.1. NC_014500.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3UTKX-ray1.65A/B1-133[»]
4K0UX-ray2.15A28-133[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198628.Dda3937_02411.

Protein family/group databases

TCDBi8.A.2.1.2. the secretin auxiliary lipoprotein (sal) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADM99380; ADM99380; Dda3937_02411.
GeneIDi9734629.
KEGGiddd:Dda3937_02411.
PATRICi42318653. VBIDicDad25310_3141.

Phylogenomic databases

eggNOGiENOG4105XQF. Bacteria.
ENOG41122AR. LUCA.
HOGENOMiHOG000063150.
KOiK02465.
OMAiKCNRSDL.

Enzyme and pathway databases

BioCyciDDAD198628:GHFQ-3244-MONOMER.

Family and domain databases

InterProiIPR005699. Chap_lipoprot_PulS/OutS.
IPR019114. Chap_lipoprot_PulS/OutS-like.
[Graphical view]
PfamiPF09691. T2SS_PulS_OutS. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01004. PulS_OutS. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Some of the out genes involved in the secretion of pectate lyases in Erwinia chrysanthemi are regulated by kdgR."
    Condemine G., Dorel C., Hugouvieux-Cotte-Pattat N., Robert-Baudouy J.
    Mol. Microbiol. 6:3199-3211(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 3937.
  2. Condemine G.
    Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3937.

Entry informationi

Entry nameiOUTS_DICD3
AccessioniPrimary (citable) accession number: Q01567
Secondary accession number(s): E0SM45
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: December 15, 1998
Last modified: November 11, 2015
This is version 83 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.