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Protein
Submitted name:

Endoxylanase

Gene

XYN3

Organism
Neocallimastix frontalis (Rumen fungus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiGH11. Glycoside Hydrolase Family 11.
mycoCLAPiXYN11C_NEOFR.

Names & Taxonomyi

Protein namesi
Submitted name:
EndoxylanaseImported
Gene namesi
Name:XYN3Imported
OrganismiNeocallimastix frontalis (Rumen fungus)Imported
Taxonomic identifieri4757 [NCBI]
Taxonomic lineageiEukaryotaFungiNeocallimastigomycotaNeocallimastigomycetesNeocallimastigalesNeocallimastigaceaeNeocallimastix

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 607589Sequence analysisPRO_5004162667Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ01421.
SMRiQ01421. Positions 30-247, 275-492, 529-562, 572-605.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini35 – 242208GH11 (glycosyl hydrolase family 11)InterPro annotationAdd
BLAST
Domaini280 – 487208GH11 (glycosyl hydrolase family 11)InterPro annotationAdd
BLAST
Domaini523 – 56341CBM10 (carbohydrate binding type-10)InterPro annotationAdd
BLAST
Domaini566 – 60641CBM10 (carbohydrate binding type-10)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.120.180. 2 hits.
3.90.1220.10. 2 hits.
InterProiIPR002883. CBM10/Dockerin_dom.
IPR013320. ConA-like_dom.
IPR009034. Dockerin_dom_fun.
IPR013319. GH11/12.
IPR018208. GH11_AS_1.
IPR033119. GH11_AS_2.
IPR033123. GH11_dom.
IPR001137. Glyco_hydro_11.
[Graphical view]
PfamiPF02013. CBM_10. 2 hits.
PF00457. Glyco_hydro_11. 2 hits.
[Graphical view]
PRINTSiPR00911. GLHYDRLASE11.
SUPFAMiSSF49899. SSF49899. 2 hits.
SSF64571. SSF64571. 2 hits.
PROSITEiPS51763. CBM10. 2 hits.
PS00776. GH11_1. 2 hits.
PS00777. GH11_2. 2 hits.
PS51761. GH11_3. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q01421-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTIKFFFAV AIATVAKAQW GGGGASAGQR LTVGNGQTQH KGVADGYSYE
60 70 80 90 100
IWLDNTGGSG SMTLGSGATF KAEWNASVNR GNLLARRGLD FGSQKKGKPI
110 120 130 140 150
TATLIGYTAT YRQTGSASGN SRLCVYGWFQ NRGVQGVPLV EYYIIEDWVD
160 170 180 190 200
WVPDAQGRMV TIDGAQYKIF QMDHTGPTIN GGSETFKQYF SVRQQKRTSG
210 220 230 240 250
HITVSDHFKE WAKQGWGIGN LYEVALNAEG WQSSGIADVT KLDVYTTQKG
260 270 280 290 300
SNPAPTSTGT VPSSSAGGST ANGKKFTVGN GQNQHKGVND GFSYEIWLDN
310 320 330 340 350
TGGNGSMTLG SGATFKAEWN AAVNRGNFLA RRGLDFGSQK KANRFDYIGL
360 370 380 390 400
DYAATYKQTA SASGNSRLCV YGWFQNRGLN GVPLVEYYII EDWVDWVPDA
410 420 430 440 450
QGKMVTIDGA QYKIFQMDHT GPTINGGSET FKQYFSVRQQ KRTSGHITVS
460 470 480 490 500
DHFKEWAKQG WGIGNLYEVA LNAEGWQSSG VADVTLLDVY TTPKGSSPAT
510 520 530 540 550
SAAPRTTTRT TTRTKSLPTN YNKCSARITA QGYKCCSDPN CVVYYTDEDG
560 570 580 590 600
TWGVENNDWC GCGVEQCSSK ITSQGYKCCS DPNCVVFYTD DDGKWGVENN

DWCGCGF
Length:607
Mass (Da):66,042
Last modified:November 1, 1996 - v1
Checksum:i65741741A52E629B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X82266 mRNA. Translation: CAA57717.1.
PIRiS49528.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X82266 mRNA. Translation: CAA57717.1.
PIRiS49528.

3D structure databases

ProteinModelPortaliQ01421.
SMRiQ01421. Positions 30-247, 275-492, 529-562, 572-605.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH11. Glycoside Hydrolase Family 11.
mycoCLAPiXYN11C_NEOFR.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.180. 2 hits.
3.90.1220.10. 2 hits.
InterProiIPR002883. CBM10/Dockerin_dom.
IPR013320. ConA-like_dom.
IPR009034. Dockerin_dom_fun.
IPR013319. GH11/12.
IPR018208. GH11_AS_1.
IPR033119. GH11_AS_2.
IPR033123. GH11_dom.
IPR001137. Glyco_hydro_11.
[Graphical view]
PfamiPF02013. CBM_10. 2 hits.
PF00457. Glyco_hydro_11. 2 hits.
[Graphical view]
PRINTSiPR00911. GLHYDRLASE11.
SUPFAMiSSF49899. SSF49899. 2 hits.
SSF64571. SSF64571. 2 hits.
PROSITEiPS51763. CBM10. 2 hits.
PS00776. GH11_1. 2 hits.
PS00777. GH11_2. 2 hits.
PS51761. GH11_3. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ01421_NEOFR
AccessioniPrimary (citable) accession number: Q01421
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.