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Q01413

- E13B_SOLLC

UniProt

Q01413 - E13B_SOLLC

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Protein
Glucan endo-1,3-beta-glucosidase B
Gene
N/A
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

Implicated in the defense of plants against pathogens.

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei265 – 2651Nucleophile By similarity
Active sitei321 – 3211Proton donor By similarity

GO - Molecular functioni

  1. glucan endo-1,3-beta-D-glucosidase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. defense response to fungus, incompatible interaction Source: EnsemblPlants/Gramene
  3. defense response to nematode Source: EnsemblPlants/Gramene
  4. response to salt stress Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Plant defense

Protein family/group databases

CAZyiGH17. Glycoside Hydrolase Family 17.

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase B (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase B
Short name:
(1->3)-beta-glucanase B
Basic beta-1,3-glucanase
Beta-1,3-endoglucanase B
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994: Chromosome 1

Subcellular locationi

Vacuole Reviewed prediction

GO - Cellular componenti

  1. cell wall Source: EnsemblPlants/Gramene
  2. vacuolar membrane Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

Vacuole

Pathology & Biotechi

Protein family/group databases

Allergomei2549. Sola l Glucanase.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 By similarity
Add
BLAST
Chaini26 – 340315Glucan endo-1,3-beta-glucosidase B
PRO_0000011852Add
BLAST
Propeptidei341 – 36020Removed in mature form Inferred
PRO_0000011853Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei26 – 261Pyrrolidone carboxylic acid Inferred
Glycosylationi350 – 3501N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein, Pyrrolidone carboxylic acid

Expressioni

Developmental stagei

Maximum expression found during days 4 to 6 and days 4 to 14 after inoculation with an avirulent and a virulent pathogen respectively.

Inductioni

Upon infection by virulent and avirulent races of pathogens, for example fungal pathogen C.fulvum.

Structurei

3D structure databases

ProteinModelPortaliQ01413.
SMRiQ01413. Positions 27-339.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

OMAiFGATHEN.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q01413-1 [UniParc]FASTAAdd to Basket

« Hide

MATSQIAIIV LLGLLVATNI HITEAQIGVC YGMMGNNLPS HSEVIQLYKS    50
RNIRRLRLYD PNHGALNALR GSNIEVILGL PNVDVKHISS GMEHARWWVQ 100
KNVRDFWPHV KIKYIAVGNE ISPVTGTSNL APFQVPALVN IYKAIGEAGL 150
GNDIKVSTSV DMTLIGNSYP PSQGSFRNDV RWFTDPIVGF LRDTRAPLLV 200
NIYPYFSYSG NPGQISLPYA LFTAPNVVVQ DGSRQYRNLF DAMLDSVYAA 250
MDRTGGGSVG IVVSESGWPS AGAFGATHEN AQTYLRNLIQ HAKEGSPRKP 300
GPIETYIFAM FDENNKNPEL EKHFGMFSPN KQPKYNLNFG VSERVWDITN 350
STASSLTSEI 360
Length:360
Mass (Da):39,719
Last modified:February 1, 1994 - v1
Checksum:iEB29C1AB76347EE1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M80608 mRNA. Translation: AAA03618.1.
PIRiS26241.
RefSeqiNP_001234805.1. NM_001247876.1.
XP_004229005.1. XM_004228957.1.
UniGeneiLes.8987.

Genome annotation databases

EnsemblPlantsiSolyc01g059980.2.1; Solyc01g059980.2.1; Solyc01g059980.2.
Solyc01g060020.2.1; Solyc01g060020.2.1; Solyc01g060020.2.
GeneIDi101261650.
543987.
KEGGisly:101261650.
sly:543987.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M80608 mRNA. Translation: AAA03618.1 .
PIRi S26241.
RefSeqi NP_001234805.1. NM_001247876.1.
XP_004229005.1. XM_004228957.1.
UniGenei Les.8987.

3D structure databases

ProteinModelPortali Q01413.
SMRi Q01413. Positions 27-339.
ModBasei Search...

Protein family/group databases

Allergomei 2549. Sola l Glucanase.
CAZyi GH17. Glycoside Hydrolase Family 17.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Solyc01g059980.2.1 ; Solyc01g059980.2.1 ; Solyc01g059980.2 .
Solyc01g060020.2.1 ; Solyc01g060020.2.1 ; Solyc01g060020.2 .
GeneIDi 101261650.
543987.
KEGGi sly:101261650.
sly:543987.

Phylogenomic databases

OMAi FGATHEN.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00332. Glyco_hydro_17. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Differential accumulation of mRNAs encoding extracellular and intracellular PR proteins in tomato induced by virulent and avirulent races of Cladosporium fulvum."
    van Kan J.A.L., Joosten M.H.A.J., Wagemakers C.A.M., van den Berg-Velthuis G.C.M., de Wit P.J.G.M.
    Plant Mol. Biol. 20:513-527(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Moneymaker.
    Tissue: Leaf.

Entry informationi

Entry nameiE13B_SOLLC
AccessioniPrimary (citable) accession number: Q01413
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: May 14, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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