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Q01413

- E13B_SOLLC

UniProt

Q01413 - E13B_SOLLC

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Protein

Glucan endo-1,3-beta-glucosidase B

Gene
N/A
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at transcript leveli

Functioni

Implicated in the defense of plants against pathogens.

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei265 – 2651NucleophileBy similarity
Active sitei321 – 3211Proton donorBy similarity

GO - Molecular functioni

  1. glucan endo-1,3-beta-D-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. defense response Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Plant defense

Protein family/group databases

CAZyiGH17. Glycoside Hydrolase Family 17.

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase B (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase B
Short name:
(1->3)-beta-glucanase B
Basic beta-1,3-glucanase
Beta-1,3-endoglucanase B
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994: Chromosome 1

Subcellular locationi

Vacuole Curated

GO - Cellular componenti

  1. vacuole Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Vacuole

Pathology & Biotechi

Protein family/group databases

Allergomei2549. Sola l Glucanase.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525By similarityAdd
BLAST
Chaini26 – 340315Glucan endo-1,3-beta-glucosidase BPRO_0000011852Add
BLAST
Propeptidei341 – 36020Removed in mature formCuratedPRO_0000011853Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei26 – 261Pyrrolidone carboxylic acidCurated
Glycosylationi350 – 3501N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein, Pyrrolidone carboxylic acid

Expressioni

Developmental stagei

Maximum expression found during days 4 to 6 and days 4 to 14 after inoculation with an avirulent and a virulent pathogen respectively.

Inductioni

Upon infection by virulent and avirulent races of pathogens, for example fungal pathogen C.fulvum.

Structurei

3D structure databases

ProteinModelPortaliQ01413.
SMRiQ01413. Positions 27-339.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

InParanoidiQ01413.
OMAiFGATHEN.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q01413-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATSQIAIIV LLGLLVATNI HITEAQIGVC YGMMGNNLPS HSEVIQLYKS
60 70 80 90 100
RNIRRLRLYD PNHGALNALR GSNIEVILGL PNVDVKHISS GMEHARWWVQ
110 120 130 140 150
KNVRDFWPHV KIKYIAVGNE ISPVTGTSNL APFQVPALVN IYKAIGEAGL
160 170 180 190 200
GNDIKVSTSV DMTLIGNSYP PSQGSFRNDV RWFTDPIVGF LRDTRAPLLV
210 220 230 240 250
NIYPYFSYSG NPGQISLPYA LFTAPNVVVQ DGSRQYRNLF DAMLDSVYAA
260 270 280 290 300
MDRTGGGSVG IVVSESGWPS AGAFGATHEN AQTYLRNLIQ HAKEGSPRKP
310 320 330 340 350
GPIETYIFAM FDENNKNPEL EKHFGMFSPN KQPKYNLNFG VSERVWDITN
360
STASSLTSEI
Length:360
Mass (Da):39,719
Last modified:February 1, 1994 - v1
Checksum:iEB29C1AB76347EE1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M80608 mRNA. Translation: AAA03618.1.
PIRiS26241.
RefSeqiNP_001234805.1. NM_001247876.1.
XP_004229005.1. XM_004228957.1.
UniGeneiLes.8987.

Genome annotation databases

EnsemblPlantsiSolyc01g059980.2.1; Solyc01g059980.2.1; Solyc01g059980.2.
Solyc01g060020.2.1; Solyc01g060020.2.1; Solyc01g060020.2.
GeneIDi101261650.
543987.
KEGGisly:101261650.
sly:543987.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M80608 mRNA. Translation: AAA03618.1 .
PIRi S26241.
RefSeqi NP_001234805.1. NM_001247876.1.
XP_004229005.1. XM_004228957.1.
UniGenei Les.8987.

3D structure databases

ProteinModelPortali Q01413.
SMRi Q01413. Positions 27-339.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

Allergomei 2549. Sola l Glucanase.
CAZyi GH17. Glycoside Hydrolase Family 17.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Solyc01g059980.2.1 ; Solyc01g059980.2.1 ; Solyc01g059980.2 .
Solyc01g060020.2.1 ; Solyc01g060020.2.1 ; Solyc01g060020.2 .
GeneIDi 101261650.
543987.
KEGGi sly:101261650.
sly:543987.

Phylogenomic databases

InParanoidi Q01413.
OMAi FGATHEN.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00332. Glyco_hydro_17. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Differential accumulation of mRNAs encoding extracellular and intracellular PR proteins in tomato induced by virulent and avirulent races of Cladosporium fulvum."
    van Kan J.A.L., Joosten M.H.A.J., Wagemakers C.A.M., van den Berg-Velthuis G.C.M., de Wit P.J.G.M.
    Plant Mol. Biol. 20:513-527(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Moneymaker.
    Tissue: Leaf.

Entry informationi

Entry nameiE13B_SOLLC
AccessioniPrimary (citable) accession number: Q01413
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: October 29, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3