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Q00YY2

- Q00YY2_OSTTA

UniProt

Q00YY2 - Q00YY2_OSTTA

Protein
Submitted name:

DNA ligase IV (ISS)

Gene

Ot11g01720

Organism
Ostreococcus tauri
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (14 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro
    4. phosphorus-oxygen lyase activity Source: InterPro

    GO - Biological processi

    1. cyclic nucleotide biosynthetic process Source: InterPro
    2. DNA ligation involved in DNA repair Source: InterPro
    3. DNA recombination Source: InterPro
    4. intracellular signal transduction Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase IV (ISS)Imported
    Gene namesi
    Ordered Locus Names:Ot11g01720Imported
    OrganismiOstreococcus tauriImported
    Taxonomic identifieri70448 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaMamiellophyceaeMamiellalesOstreococcus
    ProteomesiUP000009170: Chromosome 19

    Interactioni

    Protein-protein interaction databases

    STRINGi70448.Q00YY2.

    Structurei

    3D structure databases

    ProteinModelPortaliQ00YY2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000265334.
    KOiK10777.
    OMAiCESREQK.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.30.70.1230. 1 hit.
    3.40.50.10190. 1 hit.
    InterProiIPR001054. A/G_cyclase.
    IPR001357. BRCT_dom.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    SSF55073. SSF55073. 1 hit.
    PROSITEiPS50172. BRCT. 1 hit.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q00YY2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKDAAVDDDD DDYDDDDGDI DDPSAARRER SMDASGGPRY ASARDAPFRA     50
    LARACERVQR ERGRKKANAA RRYAALDAFH DVCLVSTRDG TRCDAFDAYR 100
    LLIPTLDKER ETYRLKHDAL AKCVVSAFDM ARASEDAKTL EDWKQKGGGN 150
    FPQAVREVLE RGHLQGREGD ADVRELTIGE VNDTLDELAA CESKHERAAT 200
    LRKLFGKMDA VMVKWACAII LKETKLRMGD KAIMRHYHRD AEDLFDWTSD 250
    LRRVCEDLPR RDVRLKRADI NVGEGLINPQ LALRKNTADA IMKTLRGRQF 300
    IIETKFDGER IQLHKDGEII NYWTRNMNDF GPRGYDVMNG LFRHLPKRCI 350
    LDGELLVWNK LRETWHPFGA IKTLIKAANL RKSKDEVFPL SNDTDDRDDG 400
    DDIAGYDPKS SKYEWYQEYM KKLTYGDLEL VYVPFDILYI GDESVRHLQL 450
    VERHAKLREH VHPVSAMCGN IKARILLATP DCEFSKIGST KQDIERALLE 500
    AIEAGDEGLV IKDLNSEWIP GDRSGNWMKI KPDYCKSEDL DVLLIGGYYG 550
    AGELRGGKIS QFLVGIIEST NDPTSAHGIK IMSFCKVGTG ISATELDDLR 600
    NRLGDYMHRE KPREMDYNVT DAYSERPDVW IWPPQRSVVV RVKGDIRCIR 650
    SMTYATGYSL RFPRVTGIRY DKTWSDILTN AELKQIIEED RPNIAMDMGE 700
    GHMNSRKRTR AAALTTLLPA HLMPVDVSGV VPESEVFKSL QIHIVNCESR 750
    EQKQELFKAI IARGGRTSEM WHSDVTHSVA ANRDGAKFIA ASHHGDVYTI 800
    DWLKQCIQQN RIVTPRPRHR LNLATSTWYG SNIMDRYGDD HAIPCNEEDI 850
    RALLHQVGDQ AKRWETSEVP AMVELTREYP NLLKSMKYCT FSECVFEIDD 900
    SCDVQHNEWM SESEHFRLML HEERFNVELR LRLFGGTMAP EGRSGTHIVR 950
    MNDDSVREEY LDDGRVLVSN GWVTKRTPRC DSSFLEAFVP ASAKWLSSVT 1000
    SGEMCTCENR CHELDRAPLK HIRQEIHGCR RLAEASASHG RLLRTVLAEY 1050
    FTRLANIVSA YDGMVVAFLG DAMLAAWLVD CTSETDERVF DAVRHAYFSA 1100
    HSILNHVHGC T 1111
    Length:1,111
    Mass (Da):126,607
    Last modified:November 14, 2006 - v1
    Checksum:i3B4852CD97145BAA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAID01000011 Genomic DNA. Translation: CAL55777.1.
    RefSeqiXP_003081974.1. XM_003081926.1.

    Genome annotation databases

    GeneIDi9832415.
    KEGGiota:Ot11g01720.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAID01000011 Genomic DNA. Translation: CAL55777.1 .
    RefSeqi XP_003081974.1. XM_003081926.1.

    3D structure databases

    ProteinModelPortali Q00YY2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 70448.Q00YY2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 9832415.
    KEGGi ota:Ot11g01720.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000265334.
    KOi K10777.
    OMAi CESREQK.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.30.70.1230. 1 hit.
    3.40.50.10190. 1 hit.
    InterProi IPR001054. A/G_cyclase.
    IPR001357. BRCT_dom.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    SSF55073. SSF55073. 1 hit.
    PROSITEi PS50172. BRCT. 1 hit.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OTTH0595Imported.

    Entry informationi

    Entry nameiQ00YY2_OSTTA
    AccessioniPrimary (citable) accession number: Q00YY2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3