Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q00YY2

- Q00YY2_OSTTA

UniProt

Q00YY2 - Q00YY2_OSTTA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

DNA ligase IV (ISS)

Gene

Ot11g01720

Organism
Ostreococcus tauri
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
  4. phosphorus-oxygen lyase activity Source: InterPro

GO - Biological processi

  1. cyclic nucleotide biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: InterPro
  4. intracellular signal transduction Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase IV (ISS)Imported
Gene namesi
Ordered Locus Names:Ot11g01720Imported
OrganismiOstreococcus tauriImported
Taxonomic identifieri70448 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaprasinophytesMamiellophyceaeMamiellalesBathycoccaceaeOstreococcus
ProteomesiUP000009170: Chromosome 19

Interactioni

Protein-protein interaction databases

STRINGi70448.Q00YY2.

Structurei

3D structure databases

ProteinModelPortaliQ00YY2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000265334.
InParanoidiQ00YY2.
KOiK10777.
OMAiCESREQK.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.30.70.1230. 1 hit.
3.40.50.10190. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEiPS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q00YY2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKDAAVDDDD DDYDDDDGDI DDPSAARRER SMDASGGPRY ASARDAPFRA
60 70 80 90 100
LARACERVQR ERGRKKANAA RRYAALDAFH DVCLVSTRDG TRCDAFDAYR
110 120 130 140 150
LLIPTLDKER ETYRLKHDAL AKCVVSAFDM ARASEDAKTL EDWKQKGGGN
160 170 180 190 200
FPQAVREVLE RGHLQGREGD ADVRELTIGE VNDTLDELAA CESKHERAAT
210 220 230 240 250
LRKLFGKMDA VMVKWACAII LKETKLRMGD KAIMRHYHRD AEDLFDWTSD
260 270 280 290 300
LRRVCEDLPR RDVRLKRADI NVGEGLINPQ LALRKNTADA IMKTLRGRQF
310 320 330 340 350
IIETKFDGER IQLHKDGEII NYWTRNMNDF GPRGYDVMNG LFRHLPKRCI
360 370 380 390 400
LDGELLVWNK LRETWHPFGA IKTLIKAANL RKSKDEVFPL SNDTDDRDDG
410 420 430 440 450
DDIAGYDPKS SKYEWYQEYM KKLTYGDLEL VYVPFDILYI GDESVRHLQL
460 470 480 490 500
VERHAKLREH VHPVSAMCGN IKARILLATP DCEFSKIGST KQDIERALLE
510 520 530 540 550
AIEAGDEGLV IKDLNSEWIP GDRSGNWMKI KPDYCKSEDL DVLLIGGYYG
560 570 580 590 600
AGELRGGKIS QFLVGIIEST NDPTSAHGIK IMSFCKVGTG ISATELDDLR
610 620 630 640 650
NRLGDYMHRE KPREMDYNVT DAYSERPDVW IWPPQRSVVV RVKGDIRCIR
660 670 680 690 700
SMTYATGYSL RFPRVTGIRY DKTWSDILTN AELKQIIEED RPNIAMDMGE
710 720 730 740 750
GHMNSRKRTR AAALTTLLPA HLMPVDVSGV VPESEVFKSL QIHIVNCESR
760 770 780 790 800
EQKQELFKAI IARGGRTSEM WHSDVTHSVA ANRDGAKFIA ASHHGDVYTI
810 820 830 840 850
DWLKQCIQQN RIVTPRPRHR LNLATSTWYG SNIMDRYGDD HAIPCNEEDI
860 870 880 890 900
RALLHQVGDQ AKRWETSEVP AMVELTREYP NLLKSMKYCT FSECVFEIDD
910 920 930 940 950
SCDVQHNEWM SESEHFRLML HEERFNVELR LRLFGGTMAP EGRSGTHIVR
960 970 980 990 1000
MNDDSVREEY LDDGRVLVSN GWVTKRTPRC DSSFLEAFVP ASAKWLSSVT
1010 1020 1030 1040 1050
SGEMCTCENR CHELDRAPLK HIRQEIHGCR RLAEASASHG RLLRTVLAEY
1060 1070 1080 1090 1100
FTRLANIVSA YDGMVVAFLG DAMLAAWLVD CTSETDERVF DAVRHAYFSA
1110
HSILNHVHGC T
Length:1,111
Mass (Da):126,607
Last modified:November 14, 2006 - v1
Checksum:i3B4852CD97145BAA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAID01000011 Genomic DNA. Translation: CAL55777.1.
RefSeqiXP_003081974.1. XM_003081926.1.

Genome annotation databases

GeneIDi9832415.
KEGGiota:Ot11g01720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAID01000011 Genomic DNA. Translation: CAL55777.1 .
RefSeqi XP_003081974.1. XM_003081926.1.

3D structure databases

ProteinModelPortali Q00YY2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 70448.Q00YY2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9832415.
KEGGi ota:Ot11g01720.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000265334.
InParanoidi Q00YY2.
KOi K10777.
OMAi CESREQK.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.30.70.1230. 1 hit.
3.40.50.10190. 1 hit.
InterProi IPR001054. A/G_cyclase.
IPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
IPR029787. Nucleotide_cyclase.
[Graphical view ]
PANTHERi PTHR10459:SF7. PTHR10459:SF7. 1 hit.
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEi PS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OTTH0595Imported.

Entry informationi

Entry nameiQ00YY2_OSTTA
AccessioniPrimary (citable) accession number: Q00YY2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3