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Q00YY2

- Q00YY2_OSTTA

UniProt

Q00YY2 - Q00YY2_OSTTA

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Protein
Submitted name: DNA ligase IV (ISS)
Gene
Ot11g01720
Organism
Ostreococcus tauri
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
  4. phosphorus-oxygen lyase activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
  3. cyclic nucleotide biosynthetic process Source: InterPro
  4. intracellular signal transduction Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase IV (ISS)Imported
Gene namesi
Ordered Locus Names:Ot11g01720Imported
OrganismiOstreococcus tauriImported
Taxonomic identifieri70448 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaMamiellophyceaeMamiellalesOstreococcus
ProteomesiUP000009170: Chromosome 6

Interactioni

Protein-protein interaction databases

STRINGi70448.Q00YY2.

Structurei

3D structure databases

ProteinModelPortaliQ00YY2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000265334.
KOiK10777.
OMAiCESREQK.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.30.70.1230. 1 hit.
3.40.50.10190. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEiPS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q00YY2-1 [UniParc]FASTAAdd to Basket

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MKDAAVDDDD DDYDDDDGDI DDPSAARRER SMDASGGPRY ASARDAPFRA     50
LARACERVQR ERGRKKANAA RRYAALDAFH DVCLVSTRDG TRCDAFDAYR 100
LLIPTLDKER ETYRLKHDAL AKCVVSAFDM ARASEDAKTL EDWKQKGGGN 150
FPQAVREVLE RGHLQGREGD ADVRELTIGE VNDTLDELAA CESKHERAAT 200
LRKLFGKMDA VMVKWACAII LKETKLRMGD KAIMRHYHRD AEDLFDWTSD 250
LRRVCEDLPR RDVRLKRADI NVGEGLINPQ LALRKNTADA IMKTLRGRQF 300
IIETKFDGER IQLHKDGEII NYWTRNMNDF GPRGYDVMNG LFRHLPKRCI 350
LDGELLVWNK LRETWHPFGA IKTLIKAANL RKSKDEVFPL SNDTDDRDDG 400
DDIAGYDPKS SKYEWYQEYM KKLTYGDLEL VYVPFDILYI GDESVRHLQL 450
VERHAKLREH VHPVSAMCGN IKARILLATP DCEFSKIGST KQDIERALLE 500
AIEAGDEGLV IKDLNSEWIP GDRSGNWMKI KPDYCKSEDL DVLLIGGYYG 550
AGELRGGKIS QFLVGIIEST NDPTSAHGIK IMSFCKVGTG ISATELDDLR 600
NRLGDYMHRE KPREMDYNVT DAYSERPDVW IWPPQRSVVV RVKGDIRCIR 650
SMTYATGYSL RFPRVTGIRY DKTWSDILTN AELKQIIEED RPNIAMDMGE 700
GHMNSRKRTR AAALTTLLPA HLMPVDVSGV VPESEVFKSL QIHIVNCESR 750
EQKQELFKAI IARGGRTSEM WHSDVTHSVA ANRDGAKFIA ASHHGDVYTI 800
DWLKQCIQQN RIVTPRPRHR LNLATSTWYG SNIMDRYGDD HAIPCNEEDI 850
RALLHQVGDQ AKRWETSEVP AMVELTREYP NLLKSMKYCT FSECVFEIDD 900
SCDVQHNEWM SESEHFRLML HEERFNVELR LRLFGGTMAP EGRSGTHIVR 950
MNDDSVREEY LDDGRVLVSN GWVTKRTPRC DSSFLEAFVP ASAKWLSSVT 1000
SGEMCTCENR CHELDRAPLK HIRQEIHGCR RLAEASASHG RLLRTVLAEY 1050
FTRLANIVSA YDGMVVAFLG DAMLAAWLVD CTSETDERVF DAVRHAYFSA 1100
HSILNHVHGC T 1111
Length:1,111
Mass (Da):126,607
Last modified:November 14, 2006 - v1
Checksum:i3B4852CD97145BAA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAID01000011 Genomic DNA. Translation: CAL55777.1.
RefSeqiXP_003081974.1. XM_003081926.1.

Genome annotation databases

GeneIDi9832415.
KEGGiota:Ot11g01720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CAID01000011 Genomic DNA. Translation: CAL55777.1 .
RefSeqi XP_003081974.1. XM_003081926.1.

3D structure databases

ProteinModelPortali Q00YY2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 70448.Q00YY2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9832415.
KEGGi ota:Ot11g01720.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000265334.
KOi K10777.
OMAi CESREQK.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.30.70.1230. 1 hit.
3.40.50.10190. 1 hit.
InterProi IPR001054. A/G_cyclase.
IPR001357. BRCT_dom.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEi PS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OTTH0595.

Entry informationi

Entry nameiQ00YY2_OSTTA
AccessioniPrimary (citable) accession number: Q00YY2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: March 19, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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