Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Fumarate lyase

Gene

OT_ostta18g01320

Organism
Ostreococcus tauri
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Fumarate lyaseImported
Gene namesi
ORF Names:OT_ostta18g01320Imported
OrganismiOstreococcus tauriImported
Taxonomic identifieri70448 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaprasinophytesMamiellophyceaeMamiellalesBathycoccaceaeOstreococcus
Proteomesi
  • UP000009170 Componenti: Chromosome 18

PTM / Processingi

Proteomic databases

PRIDEiQ00SM0.

Interactioni

Protein-protein interaction databases

STRINGi70448.Q00SM0.

Structurei

3D structure databases

ProteinModelPortaliQ00SM0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini85 – 417333Lyase_1InterPro annotationAdd
BLAST
Domaini483 – 53452FumaraseC_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IRVT. Eukaryota.
COG1027. LUCA.
HOGENOMiHOG000061737.
InParanoidiQ00SM0.
OMAiEICENYV.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q00SM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRSTLSRAT KRLRDGLIIE RNIIGIIGRD LRASEAFVEG ARGEDAVTKT
60 70 80 90 100
TATPVGVLRK NRVRAFSSVR WEQIESTRTE SDLLGTMEIP SHALYGIATA
110 120 130 140 150
RAMENYDITG NRLSKYPELV RALALTKKAC ATANRRIGLL DNEVYEAITH
160 170 180 190 200
ACDALIESSE HHHHFTVDVI QGGAGTSTNM NANEVIANLA ARKLGLPIGD
210 220 230 240 250
YAVVNPNDHV NLCQSTNDAY PTAAKLAVVL RHSSLVDAVR GVITSLRAKG
260 270 280 290 300
DEFEDVIKMG RTQLQDAVPM TLGQEFHSFA ATLAADLTYL ERNIDQMYEM
310 320 330 340 350
NLGGTAIGTS ICADTSFADE AVRALSELTG LPMRSPNDFI EASSSTSSFL
360 370 380 390 400
LFSNILRRIA IKISKICNDL RLLSSGPRCG LNEINLPAVA PGSSIMPGKI
410 420 430 440 450
NPVIPEVMNQ VCFQIIGTDA SIAAASEAAQ LQLNVFEPVI VYNLLNNMDM
460 470 480 490 500
LERGLNTLRT KCIDGITANP EVCKRSVDNS IGIVTALLPL IGYKKSSAVA
510 520 530 540 550
KEALATGRPV AEIAAQYAKP DEIAQLLRPQ AMTRARKLEK RGVCLDTPAP

LEAQAEGII
Length:559
Mass (Da):60,407
Last modified:November 14, 2006 - v1
Checksum:i2626F9F5C489B3CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAID01000018 Genomic DNA. Translation: CAL58594.1.
RefSeqiXP_003084178.1. XM_003084130.1.

Genome annotation databases

GeneIDi9838325.
KEGGiota:Ot18g01470.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAID01000018 Genomic DNA. Translation: CAL58594.1.
RefSeqiXP_003084178.1. XM_003084130.1.

3D structure databases

ProteinModelPortaliQ00SM0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70448.Q00SM0.

Proteomic databases

PRIDEiQ00SM0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9838325.
KEGGiota:Ot18g01470.

Phylogenomic databases

eggNOGiENOG410IRVT. Eukaryota.
COG1027. LUCA.
HOGENOMiHOG000061737.
InParanoidiQ00SM0.
OMAiEICENYV.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ00SM0_OSTTA
AccessioniPrimary (citable) accession number: Q00SM0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: March 16, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.