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Q00M93 (Q00M93_CANFA) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ST6GalNac1 EMBL ABC74874.1
OrganismCanis familiaris (Dog) (Canis lupus familiaris) EMBL ABC74874.1
Taxonomic identifier9615 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis

Protein attributes

Sequence length589 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q00M93 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 9B94C7B5C8462880

FASTA58966,846
        10         20         30         40         50         60 
MKIRLCRLSH LDQTTQWFLL SAVLTFFVFI LPSFVKEPNT KPFRHQHIRN EERSPESLHE 

        70         80         90        100        110        120 
VTGQAPTAGD RTMAPAVASA QEKSVWAPQA LATAYAAQED TRAEALEATS AQPTSMRGQE 

       130        140        150        160        170        180 
RKDTMPDTLP PRAQDKGVAS DRTGLPSVMS QDTRTIKGRR DQKEEPTATR KVTPGPQSKA 

       190        200        210        220        230        240 
RTTRRTPVPE SQAKALTTPG AGPMGRTRKG ATTAAAPHRD TARATPPSTS SQGRTTRRSP 

       250        260        270        280        290        300 
SLRAANFKSE PRWDFEEQYS FDTEALQPTC PDSVKVKASK SPWLQNLFLA NLTLFLDSSR 

       310        320        330        340        350        360 
FSQREWDRLE HFAPPFGFME LNQSLVQKVV TRFPPVPQQQ LLRASLPAGS SQCITCAVVG 

       370        380        390        400        410        420 
NGGILNDSRV GQEIDGHDHV FRLSGAVTKG YEQDVGTRTS FYGFTAFSIT QSLLALGGRG 

       430        440        450        460        470        480 
FPHVPLGKDV RYLHFLEGTR DYEWLEALLL NQTLVKSSLS WFRRRPQEAF RDTLQLDRYL 

       490        500        510        520        530        540 
LLHPDFMRYM KNRFLRSKTL NNIHWRIYRP TTGALLLLTA LHLCDQVSAY GFITEGHERF 

       550        560        570        580 
SDHYYDKSWK RTIFYTNHDF PLERTLWKRL HDEGIIRLYQ RPIISKPKM 

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References

[1]"Linkage disequilibrium mapping in domestic dog breeds narrows the progressive rod-cone degeneration interval and identifies ancestral disease-transmitting chromosome."
Goldstein O., Zangerl B., Pearce-Kelling S., Sidjanin D.J., Kijas J.W., Felix J., Acland G.M., Aguirre G.D.
Genomics 88:541-550(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Retina EMBL ABC74874.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DQ336165 mRNA. Translation: ABC74874.1.
RefSeqNP_001091025.1. NM_001097556.1.
UniGeneCfa.46685.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING9615.ENSCAFP00000007650.

Protein family/group databases

CAZyGT29. Glycosyltransferase Family 29.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100049002.
KEGGcfa:100049002.

Organism-specific databases

CTD55808.

Phylogenomic databases

eggNOGNOG292294.
HOGENOMHOG000231097.
HOVERGENHBG073351.
InParanoidQ00M93.
KOK03479.
OrthoDBEOG4CJVHZ.

Family and domain databases

InterProIPR001675. Glyco_trans_29.
[Graphical view]
PfamPF00777. Glyco_transf_29. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20788598.

Entry information

Entry nameQ00M93_CANFA
AccessionPrimary (citable) accession number: Q00M93
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: May 29, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)