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Reviewed, UniProtKB/Swiss-Prot Q00955 (ACAC_YEAST)

Last modified June 16, 2009. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Acetyl-CoA carboxylase
      Short name=ACC
    EC=6.4.1.2
Including the following 1 domains:
    1- Recommended name:
            Biotin carboxylase
              EC=6.3.4.14
Gene names
Name: FAS3
Synonyms: ACC1
Ordered Locus Names: YNR016C
ORF Names: N3175
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length2233 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.

Catalytic activity

ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.

ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.

Cofactor

Biotin By similarity.

Binds 2 manganese ions per subunit By similarity.

Enzyme regulation

By phosphorylation.

Pathway

Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.

Subunit structure

Homodimer. Ref.9 Ref.10 Ref.11

Subcellular location

Cytoplasm.

Miscellaneous

Present with 20200 molecules/cell in log phase SD medium. Ref.4

Sequence similarities

Contains 1 ATP-grasp domain.

Contains 1 biotin carboxylation domain.

Contains 1 biotinyl-binding domain.

Contains 1 carboxyltransferase domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 22332233Acetyl-CoA carboxylase
PRO_0000146770

Regions

Domain58 – 567510Biotin carboxylation
Domain216 – 408193ATP-grasp
Domain701 – 76767Biotinyl-binding
Domain1603 – 2101499Carboxyltransferase
Nucleotide binding256 – 2616ATP By similarity
Region1627 – 16293Acetyl-CoA binding

Sites

Active site3831 By similarity
Metal binding3651Manganese 1 By similarity
Metal binding3791Manganese 1 By similarity
Metal binding3791Manganese 2 By similarity
Metal binding3811Manganese 2 By similarity
Binding site17311Coenzyme A
Binding site19981Acetyl-CoA; via amide nitrogen
Binding site20341Coenzyme A
Binding site20361Coenzyme A

Amino acid modifications

Modified residue101Phosphoserine Ref.8
Modified residue2331Phosphothreonine Ref.8
Modified residue4301Phosphoserine Ref.8
Modified residue7351N6-biotinyllysine By similarity
Modified residue11141Phosphothreonine Ref.8
Modified residue11451Phosphothreonine Ref.8
Modified residue11481Phosphoserine Ref.8 Ref.7
Modified residue11571Phosphoserine Ref.8 Ref.3 Ref.5 Ref.6
Modified residue11591Phosphoserine Ref.8
Modified residue11621Phosphoserine Ref.8
Modified residue11631Phosphotyrosine Ref.8
Modified residue11691Phosphoserine Ref.8

Experimental info

Mutagenesis17051L → I: Raises KM for malonyl-CoA by a factor of 20. Ref.9
Mutagenesis17311R → S: Raises KM for malonyl-CoA by a factor of 15. Ref.9
Mutagenesis17381Y → F: No effect. Ref.9
Mutagenesis19541R → S: Raises KM for malonyl-CoA by a factor of 70. Ref.9
Mutagenesis19941E → Q: Lowers activity 10-fold.
Sequence conflict15231W → G in AAA20073. Ref.1
Sequence conflict17551I → IWYRCL in AAA20073. Ref.1
Sequence conflict1761 – 17666AINKML → ESTNA in AAA20073. Ref.1

Secondary structure

................................................................................................................................................................................................................................ 2233
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q00955-1 [UniParc].

Last modified October 1, 1996. Version 2.
Checksum: 0A335AAD9B1F8308

FASTA2,233250,353
        10         20         30         40         50         60 
MSEESLFESS PQKMEYEITN YSERHTELPG HFIGLNTVDK LEESPLRDFV KSHGGHTVIS 

        70         80         90        100        110        120 
KILIANNGIA AVKEIRSVRK WAYETFGDDR TVQFVAMATP EDLEANAEYI RMADQYIEVP 

       130        140        150        160        170        180 
GGTNNNNYAN VDLIVDIAER ADVDAVWAGW GHASENPLLP EKLSQSKRKV IFIGPPGNAM 

       190        200        210        220        230        240 
RSLGDKISST IVAQSAKVPC IPWSGTGVDT VHVDEKTGLV SVDDDIYQKG CCTSPEDGLQ 

       250        260        270        280        290        300 
KAKRIGFPVM IKASEGGGGK GIRQVEREED FIALYHQAAN EIPGSPIFIM KLAGRARHLE 

       310        320        330        340        350        360 
VQLLADQYGT NISLFGRDCS VQRRHQKIIE EAPVTIAKAE TFHEMEKAAV RLGKLVGYVS 

       370        380        390        400        410        420 
AGTVEYLYSH DDGKFYFLEL NPRLQVEHPT TEMVSGVNLP AAQLQIAMGI PMHRISDIRT 

       430        440        450        460        470        480 
LYGMNPHSAS EIDFEFKTQD ATKKQRRPIP KGHCTACRIT SEDPNDGFKP SGGTLHELNF 

       490        500        510        520        530        540 
RSSSNVWGYF SVGNNGNIHS FSDSQFGHIF AFGENRQASR KHMVVALKEL SIRGDFRTTV 

       550        560        570        580        590        600 
EYLIKLLETE DFEDNTITTG WLDDLITHKM TAEKPDPTLA VICGAATKAF LASEEARHKY 

       610        620        630        640        650        660 
IESLQKGQVL SKDLLQTMFP VDFIHEGKRY KFTVAKSGND RYTLFINGSK CDIILRQLSD 

       670        680        690        700        710        720 
GGLLIAIGGK SHTIYWKEEV AATRLSVDSM TTLLEVENDP TQLRTPSPGK LVKFLVENGE 

       730        740        750        760        770        780 
HIIKGQPYAE IEVMKMQMPL VSQENGIVQL LKQPGSTIVA GDIMAIMTLD DPSKVKHALP 

       790        800        810        820        830        840 
FEGMLPDFGS PVIEGTKPAY KFKSLVSTLE NILKGYDNQV IMNASLQQLI EVLRNPKLPY 

       850        860        870        880        890        900 
SEWKLHISAL HSRLPAKLDE QMEELVARSL RRGAVFPARQ LSKLIDMAVK NPEYNPDKLL 

       910        920        930        940        950        960 
GAVVEPLADI AHKYSNGLEA HEHSIFVHFL EEYYEVEKLF NGPNVREENI ILKLRDENPK 

       970        980        990       1000       1010       1020 
DLDKVALTVL SHSKVSAKNN LILAILKHYQ PLCKLSSKVS AIFSTPLQHI VELESKATAK 

      1030       1040       1050       1060       1070       1080 
VALQAREILI QGALPSVKER TEQIEHILKS SVVKVAYGSS NPKRSEPDLN ILKDLIDSNY 

      1090       1100       1110       1120       1130       1140 
VVFDVLLQFL THQDPVVTAA AAQVYIRRAY RAYTIGDIRV HEGVTVPIVE WKFQLPSAAF 

      1150       1160       1170       1180       1190       1200 
STFPTVKSKM GMNRAVSVSD LSYVANSQSS PLREGILMAV DHLDDVDEIL SQSLEVIPRH 

      1210       1220       1230       1240       1250       1260 
QSSSNGPAPD RSGSSASLSN VANVCVASTE GFESEEEILV RLREILDLNK QELINASIRR 

      1270       1280       1290       1300       1310       1320 
ITFMFGFKDG SYPKYYTFNG PNYNENETIR HIEPALAFQL ELGRLSNFNI KPIFTDNRNI 

      1330       1340       1350       1360       1370       1380 
HVYEAVSKTS PLDKRFFTRG IIRTGHIRDD ISIQEYLTSE ANRLMSDILD NLEVTDTSNS 

      1390       1400       1410       1420       1430       1440 
DLNHIFINFI AVFDISPEDV EAAFGGFLER FGKRLLRLRV SSAEIRIIIK DPQTGAPVPL 

      1450       1460       1470       1480       1490       1500 
RALINNVSGY VIKTEMYTEV KNAKGEWVFK SLGKPGSMHL RPIATPYPVK EWLQPKRYKA 

      1510       1520       1530       1540       1550       1560 
HLMGTTYVYD FPELFRQASS SQWKNFSADV KLTDDFFISN ELIEDENGEL TEVEREPGAN 

      1570       1580       1590       1600       1610       1620 
AIGMVAFKIT VKTPEYPRGR QFVVVANDIT FKIGSFGPQE DEFFNKVTEY ARKRGIPRIY 

      1630       1640       1650       1660       1670       1680 
LAANSGARIG MAEEIVPLFQ VAWNDAANPD KGFQYLYLTS EGMETLKKFD KENSVLTERT 

      1690       1700       1710       1720       1730       1740 
VINGEERFVI KTIIGSEDGL GVECLRGSGL IAGATSRAYH DIFTITLVTC RSVGIGAYLV 

      1750       1760       1770       1780       1790       1800 
RLGQRAIQVE GQPIILTGAP AINKMLGREV YTSNLQLGGT QIMYNNGVSH LTAVDDLAGV 

      1810       1820       1830       1840       1850       1860 
EKIVEWMSYV PAKRNMPVPI LETKDTWDRP VDFTPTNDET YDVRWMIEGR ETESGFEYGL 

      1870       1880       1890       1900       1910       1920 
FDKGSFFETL SGWAKGVVVG RARLGGIPLG VIGVETRTVE NLIPADPANP NSAETLIQEP 

      1930       1940       1950       1960       1970       1980 
GQVWHPNSAF KTAQAINDFN NGEQLPMMIL ANWRGFSGGQ RDMFNEVLKY GSFIVDALVD 

      1990       2000       2010       2020       2030       2040 
YKQPIIIYIP PTGELRGGSW VVVDPTINAD QMEMYADVNA RAGVLEPQGM VGIKFRREKL 

      2050       2060       2070       2080       2090       2100 
LDTMNRLDDK YRELRSQLSN KSLAPEVHQQ ISKQLADRER ELLPIYGQIS LQFADLHDRS 

      2110       2120       2130       2140       2150       2160 
SRMVAKGVIS KELEWTEARR FFFWRLRRRL NEEYLIKRLS HQVGEASRLE KIARIRSWYP 

      2170       2180       2190       2200       2210       2220 
ASVDHEDDRQ VATWIEENYK TLDDKLKGLK LESFAQDLAK KIRSDHDNAI DGLSEVIKML 

      2230 
STDDKEKLLK TLK 

« Hide

References

« Hide 'large scale' references
[1]"Cloning of the yeast FAS3 gene and primary structure of yeast acetyl-CoA carboxylase."
Al-Feel W., Chirala S.S., Wakil S.J.
Proc. Natl. Acad. Sci. U.S.A. 89:4534-4538(1992) [PubMed: 1350093] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE, PROTEIN SEQUENCE OF 2015-2022.
[2]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications."
Philippsen P., Kleine K., Poehlmann R., Duesterhoeft A., Hamberg K., Hegemann J.H., Obermaier B., Urrestarazu L.A., Aert R., Albermann K., Altmann R., Andre B., Baladron V., Ballesta J.P.G., Becam A.-M., Beinhauer J.D., Boskovic J., Buitrago M.J. expand/collapse author list , Bussereau F., Coster F., Crouzet M., D'Angelo M., Dal Pero F., De Antoni A., del Rey F., Doignon F., Domdey H., Dubois E., Fiedler T.A., Fleig U., Floeth M., Fritz C., Gaillardin C., Garcia-Cantalejo J.M., Glansdorff N., Goffeau A., Gueldener U., Herbert C.J., Heumann K., Heuss-Neitzel D., Hilbert H., Hinni K., Iraqui Houssaini I., Jacquet M., Jimenez A., Jonniaux J.-L., Karpfinger-Hartl L., Lanfranchi G., Lepingle A., Levesque H., Lyck R., Maftahi M., Mallet L., Maurer C.T.C., Messenguy F., Mewes H.-W., Moestl D., Nasr F., Nicaud J.-M., Niedenthal R.K., Pandolfo D., Pierard A., Piravandi E., Planta R.J., Pohl T.M., Purnelle B., Rebischung C., Remacha M.A., Revuelta J.L., Rinke M., Saiz J.E., Sartorello F., Scherens B., Sen-Gupta M., Soler-Mira A., Urbanus J.H.M., Valle G., Van Dyck L., Verhasselt P., Vierendeels F., Vissers S., Voet M., Volckaert G., Wach A., Wambutt R., Wedler H., Zollner A., Hani J.
Nature 387:93-98(1997) [PubMed: 9169873] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[3]"Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae."
Ficarro S.B., McCleland M.L., Stukenberg P.T., Burke D.J., Ross M.M., Shabanowitz J., Hunt D.F., White F.M.
Nat. Biotechnol. 20:301-305(2002) [PubMed: 11875433] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1157, MASS SPECTROMETRY.
[4]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed: 14562106] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[5]"A proteomics approach to understanding protein ubiquitination."
Peng J., Schwartz D., Elias J.E., Thoreen C.C., Cheng D., Marsischky G., Roelofs J., Finley D., Gygi S.P.
Nat. Biotechnol. 21:921-926(2003) [PubMed: 12872131] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1157, MASS SPECTROMETRY.
[6]"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae."
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P.
J. Proteome Res. 6:1190-1197(2007) [PubMed: 17330950] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1157, MASS SPECTROMETRY.
[7]"Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases."
Smolka M.B., Albuquerque C.P., Chen S.H., Zhou H.
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007) [PubMed: 17563356] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1148, MASS SPECTROMETRY.
[8]"A multidimensional chromatography technology for in-depth phosphoproteome analysis."
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed: 18407956] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-10; THR-233; SER-430; THR-1114; THR-1145; SER-1148; SER-1157; SER-1159; SER-1162; TYR-1163 AND SER-1169, MASS SPECTROMETRY.
[9]"Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase."
Zhang H., Yang Z., Shen Y., Tong L.
Science 299:2064-2067(2003) [PubMed: 12663926] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) OF 1429-2233 IN COMPLEX WITH COA, MUTAGENESIS OF LEU-1705; ARG-1731; TYR-1738 AND ARG-1954, HOMODIMERIZATION.
[10]"A mechanism for the potent inhibition of eukaryotic acetyl-coenzyme A carboxylase by soraphen A, a macrocyclic polyketide natural product."
Shen Y., Volrath S.L., Weatherly S.C., Elich T.D., Tong L.
Mol. Cell 16:881-891(2004) [PubMed: 15610732] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS) OF 13-566 IN COMPLEX WITH SORAPHEN, SUBUNIT.
[11]"Molecular basis for the inhibition of the carboxyltransferase domain of acetyl-coenzyme-A carboxylase by haloxyfop and diclofop."
Zhang H., Tweel B., Tong L.
Proc. Natl. Acad. Sci. U.S.A. 101:5910-5915(2004) [PubMed: 15079078] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) OF 1482-2218 IN COMPLEXES WITH THE INHIBITORS HALOXYFOP OR DICLOFOP, SUBUNIT.
+Additional computationally mapped references.

Cross-references

Sequence databases

M92156 Unassigned DNA. Translation: AAA20073.1.
Z71631 Genomic DNA. Translation: CAA96294.1.
PIRS63347.
RefSeqNP_014413.1.

3D structure databases

EntryMethodResolution (Å)ChainPositionsPDBsum
1OD2X-ray2.70A/B1429-2233[»]
1OD4X-ray2.70A/B/C1429-2233[»]
1UYRX-ray2.50A/B1482-2218[»]
1UYSX-ray2.80A/B/C1482-2218[»]
1UYTX-ray2.50A/B/C1482-2218[»]
1UYVX-ray2.60A/B/C1482-2218[»]
1W2XX-ray2.80A/B/C1476-2233[»]
1W93X-ray2.50A14-566[»]
1W96X-ray1.80A/B/C13-566[»]
ModBaseSearch...

Protein-protein interaction databases

DIPDIP:975N.
IntActQ00955. 144 interactions.

Proteomic databases

PeptideAtlasQ00955.
PRIDEQ00955.

Genome annotation databases

EnsemblYNR016C. Saccharomyces cerevisiae. [Contig view]
GeneID855750.
GenomeReviewsGene locus YNR016C in contig Y13139_GR.
KEGGsce:YNR016C.
NMPDRfig|4932.3.peg.5493.

Organism-specific databases

CYGDYNR016c.
SGDS000005299. ACC1.
Yeast-GFPSearch...

Phylogenomic databases

HOGENOMQ00955.
OMAQ00955. HTIAVRV.

Enzyme and pathway databases

BRENDA6.3.4.14. 250.
6.4.1.2. 250.

Gene expression databases

ArrayExpressQ00955.
GermOnlineYNR016C. Saccharomyces cerevisiae.

Family and domain databases

InterProIPR013537. AcCoA_COase_cen.
IPR011761. ATP-grasp.
IPR013816. ATP_grasp_subdomain_2.
IPR011764. BC.
IPR001882. Biotin_BS.
IPR005482. Biotin_COase_C.
IPR000089. Biotin_lipoyl.
IPR005479. CarbamoylP_synth_lsu_ATP-bd.
IPR005481. CarbamoylP_synth_lsu_N.
IPR000022. Carboxyl_trans.
IPR011763. COA_CT_C.
IPR011762. COA_CT_N.
IPR013817. Pre-ATP_grasp.
[Graphical view]
Gene3DG3DSA:3.30.470.20. ATP_grasp_subdomain_2. 1 hit.
G3DSA:3.40.50.20. Pre-ATP_grasp. 1 hit.
PfamPF08326. ACC_central. 1 hit.
PF02785. Biotin_carb_C. 1 hit.
PF00364. Biotin_lipoyl. 1 hit.
PF01039. Carboxyl_trans. 1 hit.
PF00289. CPSase_L_chain. 1 hit.
PF02786. CPSase_L_D2. 1 hit.
[Graphical view]
PROSITEPS50975. ATP_GRASP. 1 hit.
PS50979. BC. 1 hit.
PS00188. BIOTIN. 1 hit.
PS50968. BIOTINYL_LIPOYL. 1 hit.
PS50989. COA_CT_CTER. 1 hit.
PS50980. COA_CT_NTER. 1 hit.
PS00866. CPSASE_1. 1 hit.
PS00867. CPSASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

DrugBankDB00173. Adenine.
NextBio980163.

Entry information

Entry nameACAC_YEAST
AccessionPrimary (citable) accession number: Q00955
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: October 1, 1996
Last modified: June 16, 2009
This is version 106 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome XIV

Yeast (Saccharomyces cerevisiae) chromosome XIV: entries and gene names

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents