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Protein
Submitted name:

Gag polyprotein

Gene

gag

Organism
Fusarium oxysporum (Fusarium vascular wilt)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Nucleotidyltransferase, ProteaseImported, RNA-directed DNA polymeraseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Gag polyproteinImported
Gene namesi
Name:gagImported
OrganismiFusarium oxysporum (Fusarium vascular wilt)Imported
Taxonomic identifieri5507 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeHypocrealesNectriaceaeFusariumFusarium oxysporum species complex

Structurei

3D structure databases

ProteinModelPortaliQ00833.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini346 – 361CCHC-typeInterPro annotationAdd BLAST16

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili55 – 82Sequence analysisAdd BLAST28
Coiled coili456 – 481Sequence analysisAdd BLAST26

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR032549. DUF4939.
IPR032567. LDOC1-rel.
IPR005159. WCCH.
IPR001878. Znf_CCHC.
[Graphical view]
PANTHERiPTHR15503. PTHR15503. 1 hit.
PfamiPF16297. DUF4939. 1 hit.
PF03716. WCCH. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q00833-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSANVNPVQQ QNAAANLQGH QPAAPANPAP VNRPPTDQNM DDADDSSQSS
60 70 80 90 100
DDSEVERLRE QLGNVTNEMN EMRQMLEEFT ALQHQQNQSN NNTQQEMYNL
110 120 130 140 150
ASAANNGRDP GEVLKPSPPE YFDGTPSKLP TFLTQSRAFI TYYPNQFRND
160 170 180 190 200
SAKVMYMAGR LIKTAAQWFQ PIMNDYMTNP PYKLQPRTAL LFGENGRHEM
210 220 230 240 250
EEALKMAFGT IDEKGQAERK IKTLKQTGSA STLGVEFLQL ASKLPWDQDV
260 270 280 290 300
LMSFFFDALK EQVQQELWEK DRPRTLVEYI NMAVKIDDRQ FAWRTRNSRG
310 320 330 340 350
NKGRQDNKPR YHANQGRTRQ TDTSYGTEAG PMAIGMTKRD KSKVTCYNCG
360 370 380 390 400
KKGHYERECK NPVKTNQKYR PVPEGKKINM VKKNEEPQMA IKTINMTRKD
410 420 430 440 450
GYDMTQAKYI NNFDPTLDVH DPFLSKEETL EKYYSKLEPE QRPVLGHTAP
460 470 480 490 500
TTEVLYSRSK EEKREKRNNR EQKKRQQAKK DKTIELEWVP VPEHNQQPTK
510 520 530 540 550
GKSIFMVRKG KEIAPKTDNE PSTKEVNQEI DNIPVKVTSR RPNRHTNDPN
560 570 580 590 600
YLESCRVQRE SDARKLRNKN EKTIWNTPIV PQYDEFNQRF WTNKHQKYTE
610 620 630 640 650
LARERAITEQ DDDIYIRAYT KEMLEDPTTP EERMQAEKDL RRYPNHPNHK
660 670 680 690 700
QISWVSCTRH YCSRHQQDKI ANDCFPVQVP EHQEQKPYLI IDTVGYRVTK
710 720 730 740 750
KYRGSQVAKL EAHTETRERA LAHIQNSRHV SQWRQRVQQE VEIAEDETLD
760 770 780 790 800
QELSQINQDI TRWEGELSQD EQDILRQLDK QQLQERLIQT EEEKGRPLTE
810 820 830 840 850
GEKADIILDH EVGKMEAAYQ QKLATQNECP DDINCTKSEC SMDHPWGKGT

RHL
Length:853
Mass (Da):99,422
Last modified:November 1, 1996 - v1
Checksum:i1AEDD18CFBBA5B06
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L34658 Genomic DNA. Translation: AAA88790.1.
PIRiS60178.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L34658 Genomic DNA. Translation: AAA88790.1.
PIRiS60178.

3D structure databases

ProteinModelPortaliQ00833.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR032549. DUF4939.
IPR032567. LDOC1-rel.
IPR005159. WCCH.
IPR001878. Znf_CCHC.
[Graphical view]
PANTHERiPTHR15503. PTHR15503. 1 hit.
PfamiPF16297. DUF4939. 1 hit.
PF03716. WCCH. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ00833_FUSOX
AccessioniPrimary (citable) accession number: Q00833
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.