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Reviewed, UniProtKB/Swiss-Prot Q00825 (ATPI_ODOSI)

Last modified February 9, 2010. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    ATP synthase subunit a, chloroplastic
Alternative name(s):
    F-ATPase subunit IV
    ATP synthase F0 sector subunit a
Gene names
Name: atpI
Encoded onPlastid; Chloroplast
OrganismOdontella sinensis (Marine centric diatom)
Taxonomic identifier2839 [NCBI]
Taxonomic lineageEukaryotastramenopilesBacillariophytaCoscinodiscophyceaeBiddulphiophycidaeEupodiscalesEupodiscaceaeOdontella

Protein attributes

Sequence length242 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane By similarity. HAMAP MF_01393

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has four main subunits: a, b, b' and c By similarity. HAMAP MF_01393

Subcellular location

Plastidchloroplast thylakoid membrane; Multi-pass membrane protein By similarity HAMAP MF_01393.

Sequence similarities

Belongs to the ATPase A chain family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 242242ATP synthase subunit a, chloroplastic HAMAP MF_01393
PRO_0000002592

Regions

Transmembrane34 – 5421 Potential
Transmembrane93 – 11321 Potential
Transmembrane132 – 15221 Potential
Transmembrane188 – 21023 Potential
Transmembrane222 – 24221 Potential

Sequences

Sequence LengthMass (Da)Tools
Q00825-1 [UniParc].

Last modified April 1, 1993. Version 1.
Checksum: 2B04B423FCCA2698

FASTA24226,898
        10         20         30         40         50         60 
MYPDNFYSST FTLLAEAEVG KHFYWDIAGF LVHGQVLVVV WFVLALLLLF AVLGTRDIDR 

        70         80         90        100        110        120 
IPNSWQNFAE SAVDFVTDIA RDQLGESFYR EWVPFIGTLF LFIFGCNWAG AIIPWKLIEL 

       130        140        150        160        170        180 
PEGELAAPTN DINTTVALAL LTSLAYFYAG LSKKGFGYFK RYIQPIPLLL PINILEDFTK 

       190        200        210        220        230        240 
PLSLSFRLFG NVLADELTIT VLTSLVPLVI PLPIMALGIF AGSVQALIFS TLAAAYIAEA 


LE 

« Hide

References

« Hide 'large scale' references
[1]"Chloroplast ATPase genes in the diatom Odontella sinensis reflect cyanobacterial characters in structure and arrangement."
Pancic P.G., Strotmann H., Kowallik K.V.
J. Mol. Biol. 224:529-536(1992) [PubMed: 1532839] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"The chloroplast genome of a chlorophyll a+c-containing alga, Odontella sinensis."
Kowallik K.V., Stoebe B., Schaffran I., Kroth-Pancic P., Freier U.
Plant Mol. Biol. Rep. 13:336-342(1995)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X60752 Genomic DNA. Translation: CAA43152.1.
Z67753 Genomic DNA. Translation: CAA91689.1.
PIRS78316.
RefSeqNP_043657.1.

3D structure databases

SMRQ00825. Positions 89-238.
ModBaseSearch...

Genome annotation databases

GeneID801734.

Enzyme and pathway databases

BRENDA3.6.3.14. 142560.

Family and domain databases

HAMAPMF_01393. ATP_synth_a_bact.
[Tree]
InterProIPR000568. ATPase_F0-cplx_asu.
[Graphical view]
Gene3DG3DSA:1.20.120.220. ATPase_F0_A. 1 hit.
PANTHERPTHR11410. ATPase_F0_A. 1 hit.
PfamPF00119. ATP-synt_A. 1 hit.
[Graphical view]
PRINTSPR00123. ATPASEA.
TIGRFAMsTIGR01131. ATP_synt_6_or_A. 1 hit.
PROSITEPS00449. ATPASE_A. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPI_ODOSI
AccessionPrimary (citable) accession number: Q00825
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: April 1, 1993
Last modified: February 9, 2010
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents