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Q00825 (ATPI_ODOSI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 91. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ATP synthase subunit a, chloroplastic
Alternative name(s):
ATP synthase F0 sector subunit a
F-ATPase subunit IV
Gene names
Name:atpI
Encoded onPlastid; Chloroplast
OrganismOdontella sinensis (Marine centric diatom) (Biddulphia sinensis)
Taxonomic identifier2839 [NCBI]
Taxonomic lineageEukaryotaStramenopilesBacillariophytaMediophyceaeBiddulphiophycidaeEupodiscalesEupodiscaceaeOdontella

Protein attributes

Sequence length242 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane By similarity. HAMAP-Rule MF_01393

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has four main subunits: a, b, b' and c By similarity.

Subcellular location

Plastidchloroplast thylakoid membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01393.

Sequence similarities

Belongs to the ATPase A chain family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 242242ATP synthase subunit a, chloroplastic HAMAP-Rule MF_01393
PRO_0000002592

Regions

Transmembrane34 – 5421Helical; Potential
Transmembrane93 – 11321Helical; Potential
Transmembrane132 – 15221Helical; Potential
Transmembrane188 – 21023Helical; Potential
Transmembrane222 – 24221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q00825 [UniParc].

Last modified April 1, 1993. Version 1.
Checksum: 2B04B423FCCA2698

FASTA24226,898
        10         20         30         40         50         60 
MYPDNFYSST FTLLAEAEVG KHFYWDIAGF LVHGQVLVVV WFVLALLLLF AVLGTRDIDR 

        70         80         90        100        110        120 
IPNSWQNFAE SAVDFVTDIA RDQLGESFYR EWVPFIGTLF LFIFGCNWAG AIIPWKLIEL 

       130        140        150        160        170        180 
PEGELAAPTN DINTTVALAL LTSLAYFYAG LSKKGFGYFK RYIQPIPLLL PINILEDFTK 

       190        200        210        220        230        240 
PLSLSFRLFG NVLADELTIT VLTSLVPLVI PLPIMALGIF AGSVQALIFS TLAAAYIAEA 


LE 

« Hide

References

« Hide 'large scale' references
[1]"Chloroplast ATPase genes in the diatom Odontella sinensis reflect cyanobacterial characters in structure and arrangement."
Pancic P.G., Strotmann H., Kowallik K.V.
J. Mol. Biol. 224:529-536(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"The chloroplast genome of a chlorophyll a+c-containing alga, Odontella sinensis."
Kowallik K.V., Stoebe B., Schaffran I., Kroth-Pancic P., Freier U.
Plant Mol. Biol. Rep. 13:336-342(1995)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X60752 Genomic DNA. Translation: CAA43152.1.
Z67753 Genomic DNA. Translation: CAA91689.1.
PIRS78316.
RefSeqNP_043657.1. NC_001713.1.

3D structure databases

ProteinModelPortalQ00825.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID801734.

Phylogenomic databases

ProtClustDBCHL00046.

Family and domain databases

Gene3D1.20.120.220. 1 hit.
HAMAPMF_01393. ATP_synth_a_bact.
InterProIPR000568. ATPase_F0-cplx_asu.
IPR023011. ATPase_F0-cplx_asu_AS.
[Graphical view]
PANTHERPTHR11410. PTHR11410. 1 hit.
PfamPF00119. ATP-synt_A. 1 hit.
[Graphical view]
PRINTSPR00123. ATPASEA.
SUPFAMSSF81336. SSF81336. 1 hit.
TIGRFAMsTIGR01131. ATP_synt_6_or_A. 1 hit.
PROSITEPS00449. ATPASE_A. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPI_ODOSI
AccessionPrimary (citable) accession number: Q00825
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: April 1, 1993
Last modified: April 16, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)

Relevant documents

SIMILARITY comments

Index of protein domains and families