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Q00758 (SP5B_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 102. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Stage V sporulation protein B
Alternative name(s):
Stage III sporulation protein F
Gene names
Name:spoVB
Synonyms:spoIIIF
Ordered Locus Names:BSU27670
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length518 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes.

Subcellular location

Cell membrane; Multi-pass membrane protein Probable.

Developmental stage

SpoVB transcription takes place during the second hour of sporulation. It may be transcribed mainly, if not only, in the mother cell. Indeed, it is required only in the mother cell.

Sequence similarities

Belongs to the polysaccharide synthase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 518518Stage V sporulation protein B
PRO_0000166451

Regions

Transmembrane6 – 2621Helical; Potential
Transmembrane45 – 6521Helical; Potential
Transmembrane91 – 11121Helical; Potential
Transmembrane120 – 14021Helical; Potential
Transmembrane165 – 18521Helical; Potential
Transmembrane186 – 20621Helical; Potential
Transmembrane250 – 27021Helical; Potential
Transmembrane281 – 30121Helical; Potential
Transmembrane326 – 34621Helical; Potential
Transmembrane348 – 36821Helical; Potential
Transmembrane387 – 40721Helical; Potential
Transmembrane411 – 43121Helical; Potential
Transmembrane446 – 46621Helical; Potential
Transmembrane478 – 49821Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q00758 [UniParc].

Last modified April 1, 1993. Version 1.
Checksum: 2AE0A0F73FC4EE2B

FASTA51856,079
        10         20         30         40         50         60 
MAKQTFLKGT LILIAAGMVT RMLGFVNRVV IARFIGEEGV GLYMMAAPTF FLATTLTQFG 

        70         80         90        100        110        120 
LPVAISKLVA EASARGDHQK TKNILVMSLT ITGVLSLIFT PLFLFFAPVM AETMLTDKRT 

       130        140        150        160        170        180 
LYPLLAITPV VPIIAISSVL RGYFQGKQNM NPLAMSQVLE QVVRISLVAV CTTIFLPYGI 

       190        200        210        220        230        240 
EYAAAGAMLS SVAGELASLL YLFVCFKYKK TIKIRKHFLQ SIKNGKQTFT QLMSVSLPTT 

       250        260        270        280        290        300 
GSRFIGNLSW FFEPIVVAQS LAIAGVATVA ATKQYGELTG FAMTLLTLPS FITYSLSTAL 

       310        320        330        340        350        360 
VPAISEGMEQ KKLQVVEYRL EQAMRLCLLS GGISVVILFV FADELMRVMY GSSGAAVFIK 

       370        380        390        400        410        420 
VMAPFFLLYY FQGPLQAVLQ ALNLAGAAMM NSLIGALVKT GLIFVLATRP SLGIMGAALA 

       430        440        450        460        470        480 
IVTGMVLVTL LHAATVSKVL PISIKIKEYA LSFAVIVICG FISSAIKQYI SFGASEAVNL 

       490        500        510 
AGWIAASAAI YMILLLVFRL IKKDELRRIP IIGRLIIR 

« Hide

References

« Hide 'large scale' references
[1]"Cloning, characterization, and expression of the spoVB gene of Bacillus subtilis."
Popham D.L., Stragier P.
J. Bacteriol. 173:7942-7949(1991) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"A 17.8 kb segment in the spoVB-nadC region of the Bacillus subtilis 168 chromosome: sequencing and ruv operon identification."
Tosato V., Bolotin A., Bertani I., Valentino I., Bruschi C.V.
Submitted (DEC-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[3]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M76666 Genomic DNA. Translation: AAA22806.1.
Y15896 Genomic DNA. Translation: CAB75337.1.
AL009126 Genomic DNA. Translation: CAB14727.1.
PIRI39989.
RefSeqNP_390645.1. NC_000964.3.

3D structure databases

ProteinModelPortalQ00758.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224308.BSU27670.

Protein family/group databases

TCDB2.A.66.2.14. the multidrug/oligosaccharidyl-lipid/polysaccharide (mop) flippase superfamily.

Proteomic databases

PaxDbQ00758.

Protocols and materials databases

DNASU938022.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB14727; CAB14727; BSU27670.
GeneID938022.
KEGGbsu:BSU27670.
PATRIC18977398. VBIBacSub10457_2888.

Organism-specific databases

GenoListBSU27670. [Micado]

Phylogenomic databases

eggNOGCOG2244.
HOGENOMHOG000216710.
KOK06409.
OMAIKIRKHF.
OrthoDBEOG6CK7M9.
PhylomeDBQ00758.

Enzyme and pathway databases

BioCycBSUB:BSU27670-MONOMER.

Family and domain databases

InterProIPR024923. PG_synth_SpoVB.
IPR029303. Polysacc_synt_C.
IPR002797. Polysacc_synth.
IPR014249. Spore_V_B.
[Graphical view]
PfamPF01943. Polysacc_synt. 1 hit.
PF14667. Polysacc_synt_C. 1 hit.
[Graphical view]
PIRSFPIRSF038958. PG_synth_SpoVB. 1 hit.
TIGRFAMsTIGR02900. spore_V_B. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSP5B_BACSU
AccessionPrimary (citable) accession number: Q00758
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: April 1, 1993
Last modified: July 9, 2014
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList