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Q00758

- SP5B_BACSU

UniProt

Q00758 - SP5B_BACSU

Protein

Stage V sporulation protein B

Gene

spoVB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 104 (01 Oct 2014)
      Sequence version 1 (01 Apr 1993)
      Previous versions | rss
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    Functioni

    Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes.

    GO - Biological processi

    1. polysaccharide biosynthetic process Source: InterPro
    2. sporulation resulting in formation of a cellular spore Source: UniProtKB-KW

    Keywords - Biological processi

    Sporulation

    Enzyme and pathway databases

    BioCyciBSUB:BSU27670-MONOMER.

    Protein family/group databases

    TCDBi2.A.66.2.14. the multidrug/oligosaccharidyl-lipid/polysaccharide (mop) flippase superfamily.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Stage V sporulation protein B
    Alternative name(s):
    Stage III sporulation protein F
    Gene namesi
    Name:spoVB
    Synonyms:spoIIIF
    Ordered Locus Names:BSU27670
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001570: Chromosome

    Organism-specific databases

    GenoListiBSU27670. [Micado]

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 518518Stage V sporulation protein BPRO_0000166451Add
    BLAST

    Proteomic databases

    PaxDbiQ00758.

    Expressioni

    Developmental stagei

    SpoVB transcription takes place during the second hour of sporulation. It may be transcribed mainly, if not only, in the mother cell. Indeed, it is required only in the mother cell.

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU27670.

    Structurei

    3D structure databases

    ProteinModelPortaliQ00758.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei6 – 2621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei45 – 6521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei91 – 11121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei120 – 14021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei165 – 18521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei186 – 20621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei250 – 27021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei281 – 30121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei326 – 34621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei348 – 36821HelicalSequence AnalysisAdd
    BLAST
    Transmembranei387 – 40721HelicalSequence AnalysisAdd
    BLAST
    Transmembranei411 – 43121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei446 – 46621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei478 – 49821HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the polysaccharide synthase family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG2244.
    HOGENOMiHOG000216710.
    KOiK06409.
    OMAiIKIRKHF.
    OrthoDBiEOG6CK7M9.
    PhylomeDBiQ00758.

    Family and domain databases

    InterProiIPR024923. PG_synth_SpoVB.
    IPR029303. Polysacc_synt_C.
    IPR002797. Polysacc_synth.
    IPR014249. Spore_V_B.
    [Graphical view]
    PfamiPF01943. Polysacc_synt. 1 hit.
    PF14667. Polysacc_synt_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF038958. PG_synth_SpoVB. 1 hit.
    TIGRFAMsiTIGR02900. spore_V_B. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q00758-1 [UniParc]FASTAAdd to Basket

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    MAKQTFLKGT LILIAAGMVT RMLGFVNRVV IARFIGEEGV GLYMMAAPTF    50
    FLATTLTQFG LPVAISKLVA EASARGDHQK TKNILVMSLT ITGVLSLIFT 100
    PLFLFFAPVM AETMLTDKRT LYPLLAITPV VPIIAISSVL RGYFQGKQNM 150
    NPLAMSQVLE QVVRISLVAV CTTIFLPYGI EYAAAGAMLS SVAGELASLL 200
    YLFVCFKYKK TIKIRKHFLQ SIKNGKQTFT QLMSVSLPTT GSRFIGNLSW 250
    FFEPIVVAQS LAIAGVATVA ATKQYGELTG FAMTLLTLPS FITYSLSTAL 300
    VPAISEGMEQ KKLQVVEYRL EQAMRLCLLS GGISVVILFV FADELMRVMY 350
    GSSGAAVFIK VMAPFFLLYY FQGPLQAVLQ ALNLAGAAMM NSLIGALVKT 400
    GLIFVLATRP SLGIMGAALA IVTGMVLVTL LHAATVSKVL PISIKIKEYA 450
    LSFAVIVICG FISSAIKQYI SFGASEAVNL AGWIAASAAI YMILLLVFRL 500
    IKKDELRRIP IIGRLIIR 518
    Length:518
    Mass (Da):56,079
    Last modified:April 1, 1993 - v1
    Checksum:i2AE0A0F73FC4EE2B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M76666 Genomic DNA. Translation: AAA22806.1.
    Y15896 Genomic DNA. Translation: CAB75337.1.
    AL009126 Genomic DNA. Translation: CAB14727.1.
    PIRiI39989.
    RefSeqiNP_390645.1. NC_000964.3.
    WP_004398529.1. NZ_CM000487.1.

    Genome annotation databases

    EnsemblBacteriaiCAB14727; CAB14727; BSU27670.
    GeneIDi938022.
    KEGGibsu:BSU27670.
    PATRICi18977398. VBIBacSub10457_2888.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M76666 Genomic DNA. Translation: AAA22806.1 .
    Y15896 Genomic DNA. Translation: CAB75337.1 .
    AL009126 Genomic DNA. Translation: CAB14727.1 .
    PIRi I39989.
    RefSeqi NP_390645.1. NC_000964.3.
    WP_004398529.1. NZ_CM000487.1.

    3D structure databases

    ProteinModelPortali Q00758.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU27670.

    Protein family/group databases

    TCDBi 2.A.66.2.14. the multidrug/oligosaccharidyl-lipid/polysaccharide (mop) flippase superfamily.

    Proteomic databases

    PaxDbi Q00758.

    Protocols and materials databases

    DNASUi 938022.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB14727 ; CAB14727 ; BSU27670 .
    GeneIDi 938022.
    KEGGi bsu:BSU27670.
    PATRICi 18977398. VBIBacSub10457_2888.

    Organism-specific databases

    GenoListi BSU27670. [Micado ]

    Phylogenomic databases

    eggNOGi COG2244.
    HOGENOMi HOG000216710.
    KOi K06409.
    OMAi IKIRKHF.
    OrthoDBi EOG6CK7M9.
    PhylomeDBi Q00758.

    Enzyme and pathway databases

    BioCyci BSUB:BSU27670-MONOMER.

    Family and domain databases

    InterProi IPR024923. PG_synth_SpoVB.
    IPR029303. Polysacc_synt_C.
    IPR002797. Polysacc_synth.
    IPR014249. Spore_V_B.
    [Graphical view ]
    Pfami PF01943. Polysacc_synt. 1 hit.
    PF14667. Polysacc_synt_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF038958. PG_synth_SpoVB. 1 hit.
    TIGRFAMsi TIGR02900. spore_V_B. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Cloning, characterization, and expression of the spoVB gene of Bacillus subtilis."
      Popham D.L., Stragier P.
      J. Bacteriol. 173:7942-7949(1991) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "A 17.8 kb segment in the spoVB-nadC region of the Bacillus subtilis 168 chromosome: sequencing and ruv operon identification."
      Tosato V., Bolotin A., Bertani I., Valentino I., Bruschi C.V.
      Submitted (DEC-1997) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168.
    3. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.

    Entry informationi

    Entry nameiSP5B_BACSU
    AccessioniPrimary (citable) accession number: Q00758
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 1, 1993
    Last sequence update: April 1, 1993
    Last modified: October 1, 2014
    This is version 104 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3