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Reviewed, UniProtKB/Swiss-Prot Q00662 (BGAL_DIACA)

Last modified June 16, 2009. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Putative beta-galactosidase
      Short name=Lactase
    EC=3.2.1.23
Alternative name(s):
    SR12 protein
Gene names
Name: CARSR12
OrganismDianthus caryophyllus (Carnation) (Clove pink)
Taxonomic identifier3570 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › Caryophyllales › Caryophyllaceae › Dianthus

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Protein attributes

Sequence length731 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Tissue specificity

Senescing flower petals.

Induction

By ethylene.

Sequence similarities

Belongs to the glycosyl hydrolase 35 family.

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Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionbeta-galactosidase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 731702Putative beta-galactosidase
PRO_0000012196

Sites

Active site1871Proton donor Potential
Active site2571Nucleophile Potential

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Sequences

Sequence LengthMass (Da)Tools
Q00662-1 [UniParc].

Last modified April 1, 1993. Version 1.
Checksum: 83FA8B5A3779C051

FASTA73182,864
        10         20         30         40         50         60 
MLCGKENNVM KMMLVYVFVL ITLISCVYGN VWYDYRAIKI NDQRRILLSG SIHYPRSTPE 

        70         80         90        100        110        120 
MWPDIIEKAK DSQLDVIQTY VFWNGHEPSE GKYYFEGRYD LVKFIKLIHQ AGLFVHLRIG 

       130        140        150        160        170        180 
PFACAEWNFG GFPVWLKYVP GIEFRTDNGP FKEKMQVFTT KIVDMMKAEK LFHWQGGPII 

       190        200        210        220        230        240 
LNQIENEYGP VEWEIGAPGK AYTHWAAQMA QSLNAGVPWI MCKQDSDVPD NVIDTCNGFY 

       250        260        270        280        290        300 
CEGFVPKDKS KPKMWTENWT GWYTEYGKPV PYRPAEDVAF SVARFIQNGG SFMNYYMFHG 

       310        320        330        340        350        360 
GTNFETTAGR FVSTSYDYDA PLDEYGLPRE PKYTHLKNLH KAIKMCEPAL VSSDAKVTNL 

       370        380        390        400        410        420 
GSNQEAHVYS SNSGSCAAFL ANYDPKWSVK VTFSGMEFEL PAWSISILPD CKKEVYNTAR 

       430        440        450        460        470        480 
VNEPSPKLHS KMTPVISNLN WQSYSDEVPT ADSPGTFREK KLYEQINMTW DKSDYLWYMT 

       490        500        510        520        530        540 
DVVLDGNEGF LKKGDEPWLT VNSAGHVLHV FVNGQLQGHA YGSLAKPQLT FSQKVKMTAG 

       550        560        570        580        590        600 
VNRISLLSAV VGLANVGWHF ERYNQGVLGP VTLSGLNEGT RDLTWQYWSY KIGTKGEEQQ 

       610        620        630        640        650        660 
VYNSGGSSHV QWGPPAWKQP LVWYKTTFDA PGGNDPLALD LGSMGKGQAW INGQSIGRHW 

       670        680        690        700        710        720 
SNNIAKGSCN DNCNYAGTYT ETKCLSDCGK SSQKWYHVPR SWLQPRGNLL VVFEEWGGDT 

       730 
KWVSLVKRTI A

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References

[1]"Characterization of an ethylene-regulated flower senescence-related gene from carnation."
Raghothama K.G., Lawton K.A., Goldsbrough P.B., Woodson W.R.
Plant Mol. Biol. 17:61-71(1991) [PubMed: 1868223] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: cv. White Sim.
Tissue: Petal.

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Cross-references

Sequence databases

X57171 Genomic DNA. Translation: CAA40459.1.
PIRS16595.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGH35. Glycoside Hydrolase Family 35.

Enzyme and pathway databases

BRENDA3.2.1.23. 21500.

Family and domain databases

InterProIPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_sg_catalytic.
IPR001944. Glycoside_Hdrlase_35.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR23421. Glyco_hydro_35. 1 hit.
PfamPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
PROSITEPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameBGAL_DIACA
AccessionPrimary (citable) accession number: Q00662
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: April 1, 1993
Last modified: June 16, 2009
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

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Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents