Reviewed, UniProtKB/Swiss-Prot Q00374 (PLYA_COLGL)

Names and origin

Protein names

Recommended name:
    Pectin lyase
    EC=4.2.2.10

Gene names

Name:

PNLA

Organism

Colletotrichum gloeosporioides (Anthracnose fungus) (Glomerella cingulata)

Taxonomic identifier

474922 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Pezizomycotina › Sordariomycetes › Hypocreomycetidae › Hypocreomycetidae incertae sedis › Glomerellaceae › Glomerella

Protein attributes

Sequence length	380 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Eliminative cleavage of (1->4)-alpha-D-galacturonan methyl ester to give oligosaccharides with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronosyl groups at their non-reducing ends.
Subcellular location	Secreted Potential.
Sequence similarities	Belongs to the polysaccharide lyase 1 family.

Ontologies

Keywords
Cellular component	Secreted
Domain	Signal
Molecular function	Lyase
PTM	Glycoprotein
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	pectin lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential
	Chain	21 – 380	360	Pectin lyase		PRO_0000024899
Amino acid modifications
	Glycosylation	130	1	N-linked (GlcNAc...) Potential

Sequences

	Sequence		Length	Mass (Da)
	Q00374-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 3DF9A99FBB482053	FASTA	380	39,326
	10 20 30 40 50 60 MRSASILSAA LAAFAPLASA ADAVSGAAEG FAKGVTGGGS ATPVYPSTTA ELASYLKDSS 70 80 90 100 110 120 ARVIVLTKTF DFTGTEGTTT ETGCAPYGTA AACQVAINKD NWCTNYQPNA PKVSVSYDKA 130 140 150 160 170 180 PFNPLIVGSN KSLIGQGSKG VIKGKGLRIT NSAKNVIIQN IHITNLNPKY VWGGDAISLD 190 200 210 220 230 240 GTDLVWFDHV KTSLIGRQHI VLGNGASNRV TISNNEIDGS TSWSATCDNH HYWGVYLTGS 250 260 270 280 290 300 NDMVTFSKNY IHHTSGRSPK IAGNSLVHIS GNYFYANSGH AMEADAGAKV VLEGNVFQNV 310 320 330 340 350 360 VAAMQSGLAG KVFSSPDANT NAQCSSYLGH TCQLNAYGSS GSLSGSDTSI LSSFSGKNVA 370 380 ATVTANDAKN VPNTAGFGKI

References

[1]	"The pectin lyase-encoding gene (pnl) family from Glomerella cingulata: characterization of pnlA and its expression in yeast." Templeton M.D., Sharrock K.R., Bowen J.K., Crowhurst R.N., Rikkerink E.H. Gene 142:141-146(1994) [PubMed: 8181749] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	L22857 Genomic DNA. Translation: AAA21817.1.
3D structure databases
HSSP	HSSP built from PDB template 1QCX based on UniProtKB Q00205.
ModBase	Search...
Protein family/group databases
CAZy	PL1. Polysaccharide Lyase Family 1.
Enzyme and pathway databases
BRENDA	4.2.2.10. 39832.
Family and domain databases
InterPro	IPR002022. Amb_allergen. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF00544. Pec_lyase_C. 1 hit. [Graphical view]
SMART	SM00656. Amb_all. 1 hit. SM00710. PbH1. 3 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

PLYA_COLGL

Accession

Primary (citable) accession number: Q00374

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	November 1, 1996
Last modified:	November 3, 2009
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

FPAP (Fungal Proteome Annotation Project)