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Q00033 (NSP1_ROTPC) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Non-structural protein 1

Short name=NSP1
Alternative name(s):
NCVP2
Non-structural RNA-binding protein 53
Short name=NS53
OrganismRotavirus C (strain Pig/United States/Cowden/1980) (RV-C) [Complete proteome]
Taxonomic identifier10916 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostSus scrofa (Pig) [TaxID: 9823]

Protein attributes

Sequence length393 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the rotavirus C NSP1 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 393393Non-structural protein 1
PRO_0000149560

Regions

Zinc finger39 – 6830 Potential
Region2 – 7776RNA-binding By similarity

Sequences

Sequence LengthMass (Da)Tools
Q00033 [UniParc].

Last modified December 1, 1992. Version 1.
Checksum: DB7FAD9AE2E3636F

FASTA39346,438
        10         20         30         40         50         60 
MANSYREMLY WFGKTIDRNL PYVNTNGWRK QKGRKDGICL NCLDECKLYS CDHCGIKHKC 

        70         80         90        100        110        120 
GNCVLSECFL DVKNEFNKYR WLVFDEEPDQ AVLLQHWIMY KDYFLQKFNY RLATQAKILN 

       130        140        150        160        170        180 
MNKNQKFQLN EGRKRALSVP ITSQFLKFRL FGKIYIQFGT IMTNKIQPWL ELSTLKIGYL 

       190        200        210        220        230        240 
QLLNVERCSE LMATRGQFTT NVAKTACITE IKCRRPIYDN DCIIEAYLDK NDRGWKFAAI 

       250        260        270        280        290        300 
LGRRKIPVTQ KLAMEYFMKS LRAELFYYAH SRCHTLSNCP RWNEGLRLLN SSTLNIVFRR 

       310        320        330        340        350        360 
QFMNEIVEWF EIFSQYTGSH YEFITECVHD KSAITAFKQE IEDYIKEGKQ ITLKSVVPEE 

       370        380        390 
HAAYRHILRL RESLMLAIDA ALSRIRSQSM GVL 

« Hide

References

[1]"Sequence analysis of three non structural proteins of a porcine group C (Cowden strain) rotavirus."
Bremont M., Chabanne-Vautherot D., Cohen J.
Arch. Virol. 130:85-92(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X60546 mRNA. Translation: CAA43036.1.
PIRA48357.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameNSP1_ROTPC
AccessionPrimary (citable) accession number: Q00033
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: December 1, 1992
Last modified: February 19, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families