Reviewed,
UniProtKB/Swiss-Prot P98159 (NUDEL_DROME)
Last modified
June 16, 2009.
Version 81.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Serine protease nudel EC=3.4.21.- | ||||
| Gene names |
| ||||
| Organism | Drosophila melanogaster (Fruit fly) [Complete proteome] | ||||
| Taxonomic identifier | 7227 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 2616 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Component of the extracellular signaling pathway that establishes the dorsal-ventral pathway of the embryo. Three proteases; ndl, gd and snk process easter to create active easter. Active easter defines cell identities along the dorsal-ventral continuum by activating the spz ligand for the Tl receptor in the ventral region of the embryo. Nudel, pipe and windbeutel together trigger the protease cascade within the extraembryonic perivitelline compartment which induces dorsoventral polarity of the Drosophila embryo. Ref.1 |
| Subcellular location | Secreted › extracellular space › extracellular matrix. Ref.1 |
| Tissue specificity | Follicle. Ref.1 |
| Post-translational modification | Requires cleavage for activation (presumably). |
| Sequence similarities | Belongs to the peptidase S1 family. Contains 11 LDL-receptor class A domains. Contains 2 peptidase S1 domains. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 43 | 43 | Potential | ||||||||
| Chain | 44 – 2616 | 2573 | Serine protease nudel | PRO_0000028136 | |||||||
Regions | |||||||||||
| Repeat | 261 – 269 | 9 | WIID 1 | ||||||||
| Repeat | 320 – 328 | 9 | WIID 2 | ||||||||
| Repeat | 399 – 407 | 9 | WIID 3 | ||||||||
| Repeat | 446 – 454 | 9 | WIID 4 | ||||||||
| Repeat | 477 – 485 | 9 | WIID 5 | ||||||||
| Repeat | 528 – 536 | 9 | WIID 6 | ||||||||
| Domain | 889 – 929 | 41 | LDL-receptor class A 1 | ||||||||
| Domain | 929 – 956 | 28 | LDL-receptor class A 2; truncated | ||||||||
| Domain | 955 – 1006 | 52 | LDL-receptor class A 3 | ||||||||
| Domain | 1145 – 1383 | 239 | Peptidase S1 1 | ||||||||
| Domain | 1394 – 1432 | 39 | LDL-receptor class A 4 | ||||||||
| Domain | 1713 – 1743 | 31 | LDL-receptor class A 5; truncated | ||||||||
| Domain | 1745 – 1775 | 31 | LDL-receptor class A 6; truncated | ||||||||
| Domain | 1774 – 1813 | 40 | LDL-receptor class A 7 | ||||||||
| Domain | 2027 – 2301 | 275 | Peptidase S1 2 | ||||||||
| Domain | 2308 – 2346 | 39 | LDL-receptor class A 8 | ||||||||
| Domain | 2349 – 2389 | 41 | LDL-receptor class A 9 | ||||||||
| Domain | 2387 – 2419 | 33 | LDL-receptor class A 10; truncated | ||||||||
| Domain | 2419 – 2459 | 41 | LDL-receptor class A 11 | ||||||||
| Motif | 1031 – 1033 | 3 | Cell attachment site Potential | ||||||||
| Compositional bias | 1489 – 1702 | 214 | Ser/Thr-rich | ||||||||
Sites | |||||||||||
| Active site | 1185 | 1 | Charge relay system By similarity | ||||||||
| Active site | 1233 | 1 | Charge relay system By similarity | ||||||||
| Active site | 1332 | 1 | Charge relay system By similarity | ||||||||
Amino acid modifications | |||||||||||
| Modified residue | 215 | 1 | Phosphoserine Ref.5 | ||||||||
| Modified residue | 220 | 1 | Phosphoserine Ref.5 | ||||||||
| Modified residue | 574 | 1 | Phosphoserine Ref.5 | ||||||||
| Modified residue | 581 | 1 | Phosphoserine Ref.5 | ||||||||
| Modified residue | 1134 | 1 | Phosphoserine Ref.5 | ||||||||
| Modified residue | 1136 | 1 | Phosphoserine Ref.5 | ||||||||
| Glycosylation | 291 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 347 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 379 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 417 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 492 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 515 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 598 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 794 | 1 | O-linked (Xyl...) (glycosaminoglycan) Potential | ||||||||
| Glycosylation | 827 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 829 | 1 | O-linked (Xyl...) (glycosaminoglycan) Potential | ||||||||
| Glycosylation | 861 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 975 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1064 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1445 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1878 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1956 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2023 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2144 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2173 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2197 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2237 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2269 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2420 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2556 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2601 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 891 ↔ 905 | By similarity | |||||||||
| Disulfide bond | 899 ↔ 918 | By similarity | |||||||||
| Disulfide bond | 912 ↔ 927 | By similarity | |||||||||
| Disulfide bond | 957 ↔ 982 | By similarity | |||||||||
| Disulfide bond | 964 ↔ 995 | By similarity | |||||||||
| Disulfide bond | 989 ↔ 1004 | By similarity | |||||||||
| Disulfide bond | 1170 ↔ 1186 | By similarity | |||||||||
| Disulfide bond | 1276 ↔ 1338 | Potential | |||||||||
| Disulfide bond | 1305 ↔ 1317 | By similarity | |||||||||
| Disulfide bond | 1328 ↔ 1359 | By similarity | |||||||||
| Disulfide bond | 1396 ↔ 1408 | By similarity | |||||||||
| Disulfide bond | 1401 ↔ 1421 | By similarity | |||||||||
| Disulfide bond | 1415 ↔ 1430 | By similarity | |||||||||
| Disulfide bond | 1728 ↔ 1745 | By similarity | |||||||||
| Disulfide bond | 1734 ↔ 1764 | By similarity | |||||||||
| Disulfide bond | 1758 ↔ 1773 | By similarity | |||||||||
| Disulfide bond | 1776 ↔ 1789 | By similarity | |||||||||
| Disulfide bond | 1783 ↔ 1802 | By similarity | |||||||||
| Disulfide bond | 1796 ↔ 1811 | By similarity | |||||||||
| Disulfide bond | 2055 ↔ 2071 | By similarity | |||||||||
| Disulfide bond | 2177 ↔ 2230 | By similarity | |||||||||
| Disulfide bond | 2310 ↔ 2320 | By similarity | |||||||||
| Disulfide bond | 2315 ↔ 2333 | By similarity | |||||||||
| Disulfide bond | 2327 ↔ 2344 | By similarity | |||||||||
| Disulfide bond | 2351 ↔ 2364 | By similarity | |||||||||
| Disulfide bond | 2358 ↔ 2377 | By similarity | |||||||||
| Disulfide bond | 2371 ↔ 2387 | By similarity | |||||||||
| Disulfide bond | 2421 ↔ 2435 | By similarity | |||||||||
| Disulfide bond | 2428 ↔ 2448 | By similarity | |||||||||
| Disulfide bond | 2442 ↔ 2457 | By similarity | |||||||||
Experimental info | |||||||||||
| Sequence conflict | 83 | 1 | I → T in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 120 | 1 | F → L in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 363 | 1 | N → T in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 831 | 1 | Q → R in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 864 | 1 | N → S in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1150 | 1 | Y → H in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1344 | 1 | P → A in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1410 | 1 | A → S in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1607 | 1 | I → M in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1632 | 1 | K → I in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1670 | 1 | L → P in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1794 | 1 | S → K in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1863 | 1 | D → N in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1886 – 1888 | 3 | HEM → QEK in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 1903 | 1 | S → A in AAA83086. Ref.1 | ||||||||
| Sequence conflict | 2147 | 1 | H → N in AAA83086. Ref.1 | ||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "An unusual mosaic protein with a protease domain, encoded by the nudel gene, is involved in defining embryonic dorsoventral polarity in Drosophila." Hong C.C., Hashimoto C. Cell 82:785-794(1995) [PubMed: 7671306] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. Strain: Oregon-R. Tissue: Ovary. |
| [2] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| [3] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: GENOME REANNOTATION. |
| [4] | "Positive and negative regulation of Easter, a member of the serine protease family that controls dorsal-ventral patterning in the Drosophila embryo." Misra S., Hecht P., Maeda R., Anderson K.V. Development 125:1261-1267(1998) [PubMed: 9477324] [Abstract] Cited for: CLEAVAGE OF EASTER. |
| [5] | "Phosphoproteome analysis of Drosophila melanogaster embryos." Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P. J. Proteome Res. 7:1675-1682(2008) [PubMed: 18327897] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-215; SER-220; SER-574; SER-581; SER-1134 AND SER-1136, MASS SPECTROMETRY. Tissue: Embryo. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| U29153 mRNA. Translation: AAA83086.1. AE014296 Genomic DNA. Translation: AAF50656.1. | |
| PIR | A57096. |
| RefSeq | NP_523947.2. |
| UniGene | Dm.2737 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1FDP based on UniProtKB P00746. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P98159. 1 interaction. |
Protein family/group databases | |
| MEROPS | S01.013. |
Genome annotation databases | |
| Ensembl | FBgn0002926. Drosophila melanogaster. [Contig view] |
| GeneID | 38738. |
| KEGG | dme:Dmel_CG10129. |
| NMPDR | fig|7227.3.peg.8553. |
Organism-specific databases | |
| FlyBase | FBgn0002926. ndl. |
Phylogenomic databases | |
| HOGENOM | P98159. |
| OMA | P98159. ASEDICA. |
Enzyme and pathway databases | |
| BioCyc | DMEL-XXX-02:DMEL-XXX-02-015462-MON. |
Gene expression databases | |
| ArrayExpress | P98159. |
| GermOnline | CG10129. Drosophila melanogaster. |
Family and domain databases | |
| InterPro | IPR015420. DUF1986. IPR002172. LDL_rcpt_classA_cys-rich. IPR018114. Peptidase_S1/S6_AS. IPR001254. Peptidase_S1_S6. IPR001314. Peptidase_S1A. [Graphical view] |
| Gene3D | G3DSA:4.10.400.10. LDL_rcpt_classA_cys-rich. 5 hits. |
| Pfam | PF09342. DUF1986. 1 hit. PF00057. Ldl_recept_a. 5 hits. PF00089. Trypsin. 1 hit. [Graphical view] |
| PRINTS | PR00722. CHYMOTRYPSIN. PR00261. LDLRECEPTOR. |
| SMART | SM00192. LDLa. 9 hits. SM00020. Tryp_SPc. 1 hit. [Graphical view] |
| PROSITE | PS01209. LDLRA_1. 6 hits. PS50068. LDLRA_2. 8 hits. PS50240. TRYPSIN_DOM. 2 hits. PS00134. TRYPSIN_HIS. 1 hit. PS00135. TRYPSIN_SER. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 810123. |
Entry information
| Entry name | NUDEL_DROME | ||||||||
| Accession | Primary (citable) accession number: P98159 Secondary accession number(s): Q9VRX5 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | Drosophila annotation project | ||||||||
Relevant documents
| Drosophila Drosophila: entries, gene names and cross-references to FlyBase |
| Peptidase families Classification of peptidase families and list of entries |
| SIMILARITY comments Index of protein domains and families |

Clusters with


