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Protein

Mucin-5AC

Gene

MUC5AC

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Gel-forming glycoprotein of gastric and respiratoy tract epithelia that protects the mucosa from infection and chemical damage by binding to inhaled microrganisms and particles that are subsequently removed by the mucocilary system.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sitei4926 – 49272Cleavage

GO - Molecular functioni

  1. extracellular matrix structural constituent Source: UniProtKB

GO - Biological processi

  1. cellular protein metabolic process Source: Reactome
  2. extracellular fibril organization Source: MGI
  3. O-glycan processing Source: Reactome
  4. phosphatidylinositol-mediated signaling Source: UniProtKB
  5. post-translational protein modification Source: Reactome
  6. protein O-linked glycosylation Source: Reactome
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_115606. O-linked glycosylation of mucins.
REACT_115835. Termination of O-glycan biosynthesis.

Protein family/group databases

MEROPSiI08.951.

Names & Taxonomyi

Protein namesi
Recommended name:
Mucin-5ACCurated
Short name:
MUC-5ACCurated
Alternative name(s):
Gastric mucin1 Publication
Lewis B blood group antigen1 Publication
Short name:
LeB1 Publication
Major airway glycoprotein1 Publication
Mucin-5 subtype AC, tracheobronchial
Tracheobronchial mucin1 Publication
Short name:
TBM1 Publication
Gene namesi
Name:MUC5AC1 PublicationImported
Synonyms:MUC51 Publication
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 11

Organism-specific databases

HGNCiHGNC:7515. MUC5AC.

Subcellular locationi

  1. Secreted 1 Publication

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB
  2. extracellular space Source: UniProtKB
  3. extracellular vesicular exosome Source: UniProtKB
  4. fibril Source: MGI
  5. Golgi lumen Source: Reactome
Complete GO annotation...

Keywords - Cellular componenti

Secreted

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi2122 – 21221W → A: No binding to mannose-specific lectin. Loss of secretion from the endoplasmic reticulum. 1 Publication
Mutagenesisi4926 – 49261D → A or E: Abolishes cleavage. 1 Publication

Polymorphism and mutation databases

DMDMi160370004.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727Sequence AnalysisAdd
BLAST
Chaini28 – 56545627Mucin-5ACSequence AnalysisPRO_0000158957Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi103 ↔ 111PROSITE-ProRule annotation
Glycosylationi205 – 2051N-linked (GlcNAc...)Sequence Analysis
Glycosylationi258 – 2581N-linked (GlcNAc...)Sequence Analysis
Glycosylationi415 – 4151N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi456 ↔ 464PROSITE-ProRule annotation
Glycosylationi524 – 5241N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1308 – 13081N-linked (GlcNAc...)Sequence Analysis
Glycosylationi1389 – 13891C-linked (Man)Curated
Glycosylationi1584 – 15841C-linked (Man)Curated
Glycosylationi1749 – 17491C-linked (Man)Curated
Glycosylationi1957 – 19571C-linked (Man)Curated
Glycosylationi2122 – 21221C-linked (Man)1 Publication
Glycosylationi3228 – 32281C-linked (Man)Curated
Glycosylationi3526 – 35261C-linked (Man)Curated
Glycosylationi3774 – 37741N-linked (GlcNAc...)Sequence Analysis
Glycosylationi3959 – 39591C-linked (Man)Curated
Glycosylationi4633 – 46331C-linked (Man)Curated
Glycosylationi4869 – 48691N-linked (GlcNAc...)Sequence Analysis
Glycosylationi4942 – 49421N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5057 – 50571N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5093 – 50931N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5236 – 52361N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5347 – 53471N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5377 – 53771N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5386 – 53861N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5455 – 54551N-linked (GlcNAc...)Sequence Analysis
Glycosylationi5528 – 55281N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi5532 ↔ 5582PROSITE-ProRule annotation
Disulfide bondi5546 ↔ 5596PROSITE-ProRule annotation
Disulfide bondi5557 ↔ 5612PROSITE-ProRule annotation
Disulfide bondi5561 ↔ 5614PROSITE-ProRule annotation
Glycosylationi5591 – 55911N-linked (GlcNAc...)Sequence Analysis

Post-translational modificationi

C-, O- and N-glycosylated. O-glycosylated on the Thr-/Ser-rich tandem repeats. C-mannosylation in the Cys-rich subdomains may be required for proper folding of these regions and for export from the endoplasmic reticulum during biosynthesis.1 Publication
Proteolytic cleavage in the C-terminal is initiated early in the secretory pathway and does not involve a serine protease. The extent of cleavage is increased in the acidic parts of the secretory pathway. Cleavage generates a reactive group which could link the protein to a primary amide.1 Publication

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

MaxQBiP98088.
PRIDEiP98088.

PTM databases

UniCarbKBiP98088.

Expressioni

Tissue specificityi

Highly expressed in surface mucosal cells of respiratory tract and stomach epithelia. Overexpressed in a number of carcinomas. Also expressed in Barrett's esophagus epithelium and in the proximal duodenum.2 Publications

Gene expression databases

GenevestigatoriP98088.

Organism-specific databases

HPAiHPA040456.
HPA040615.

Interactioni

Subunit structurei

Multimeric. Interacts with H.pylori in the gastric epithelium, Barrett's esophagus as well as in gastric metaplasia of the duodenum (GMD).1 Publication

Protein-protein interaction databases

IntActiP98088. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliP98088.
SMRiP98088. Positions 336-394, 800-873, 4589-4652, 4903-4994.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini80 – 281202VWFD 1PROSITE-ProRule annotationAdd
BLAST
Domaini338 – 39457TIL 1Sequence AnalysisAdd
BLAST
Domaini394 – 46572VWFC 1PROSITE-ProRule annotationAdd
BLAST
Domaini433 – 647215VWFD 2PROSITE-ProRule annotationAdd
BLAST
Domaini704 – 76158TIL 2Sequence AnalysisAdd
BLAST
Domaini818 – 86346TIL 3Sequence AnalysisAdd
BLAST
Domaini902 – 1109208VWFD 3PROSITE-ProRule annotationAdd
BLAST
Repeati1383 – 148199Cys-rich subdomain 1Add
BLAST
Repeati1577 – 1677101Cys-rich subdomain 2Add
BLAST
Repeati1743 – 1847105Cys-rich subdomain 3Add
BLAST
Repeati1950 – 2050101Cys-rich subdomain 4Add
BLAST
Repeati2116 – 2220105Cys-rich subdomain 5Add
BLAST
Repeati3222 – 3326105Cys-rich subdomain 6Add
BLAST
Repeati3520 – 3660141Cys-rich subdomain 7Add
BLAST
Repeati3953 – 4057105Cys-rich subdomain 8Add
BLAST
Repeati4627 – 4731105Cys-rich subdomain 9Add
BLAST
Domaini4852 – 491867VWFC 2PROSITE-ProRule annotationAdd
BLAST
Domaini4920 – 5131212VWFD 4PROSITE-ProRule annotationAdd
BLAST
Domaini5276 – 534570VWFC 3PROSITE-ProRule annotationAdd
BLAST
Domaini5381 – 544868VWFC 4PROSITE-ProRule annotationAdd
BLAST
Domaini5532 – 562089CTCKPROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni1383 – 473133499 X Cys-rich subdomain repeatsAdd
BLAST
Regioni2257 – 3200944107 X 8 AA approximate tandem repeats of T-T-S-T-T-S-A-PAdd
BLAST
Regioni3363 – 349813617 X 8 AA approximate tandem repeats of T-T-S-T-T-S-A-PAdd
BLAST
Regioni3661 – 393127134 X 8 AA approximate tandem repeats of T-T-S-T-T-S-A-PAdd
BLAST
Regioni4093 – 459550358 X 8 AA approximate tandem repeats of T-T-S-T-T-S-A-PAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi1490 – 158596Thr-richPROSITE-ProRule annotationAdd
BLAST
Compositional biasi1681 – 175070Thr-richPROSITE-ProRule annotationAdd
BLAST
Compositional biasi1850 – 1958109Thr-richPROSITE-ProRule annotationAdd
BLAST
Compositional biasi2054 – 212471Thr-richPROSITE-ProRule annotationAdd
BLAST
Compositional biasi2223 – 46182396Thr-richPROSITE-ProRule annotationAdd
BLAST
Compositional biasi2231 – 46152385Ser-richPROSITE-ProRule annotationAdd
BLAST
Compositional biasi4750 – 477829Ser-richPROSITE-ProRule annotationAdd
BLAST
Compositional biasi5520 – 55256Poly-ProSequence Analysis

Domaini

The cysteine residues in the Cys-rich subdomain repeats are not involved in disulfide bonding.

Sequence similaritiesi

Contains 1 CTCK (C-terminal cystine knot-like) domain.PROSITE-ProRule annotation
Contains 3 TIL (trypsin inhibitory-like) domains.Sequence Analysis
Contains 4 VWFC domains.PROSITE-ProRule annotation
Contains 4 VWFD domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

GeneTreeiENSGT00760000118896.
InParanoidiP98088.

Family and domain databases

InterProiIPR006207. Cys_knot_C.
IPR002919. TIL_dom.
IPR014853. Unchr_dom_Cys-rich.
IPR006552. VWC_out.
IPR001007. VWF_C.
IPR001846. VWF_type-D.
IPR025155. WxxW_domain.
[Graphical view]
PfamiPF08742. C8. 4 hits.
PF13330. Mucin2_WxxW. 9 hits.
PF01826. TIL. 3 hits.
PF00094. VWD. 4 hits.
[Graphical view]
SMARTiSM00832. C8. 4 hits.
SM00041. CT. 1 hit.
SM00214. VWC. 6 hits.
SM00215. VWC_out. 2 hits.
SM00216. VWD. 4 hits.
[Graphical view]
SUPFAMiSSF57567. SSF57567. 4 hits.
PROSITEiPS01185. CTCK_1. 1 hit.
PS01225. CTCK_2. 1 hit.
PS01208. VWFC_1. 2 hits.
PS50184. VWFC_2. 2 hits.
PS51233. VWFD. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P98088-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVGRRKLAL LWALALALAC TRHTGHAQDG SSESSYKHHP ALSPIARGPS
60 70 80 90 100
GVPLRGATVF PSLRTIPVVR ASNPAHNGRV CSTWGSFHYK TFDGDVFRFP
110 120 130 140 150
GLCNYVFSEH CGAAYEDFNI QLRRSQESAA PTLSRVLMKV DGVVIQLTKG
160 170 180 190 200
SVLVNGHPVL LPFSQSGVLI QQSSSYTKVE ARLGLVLMWN HDDSLLLELD
210 220 230 240 250
TKYANKTCGL CGDFNGMPVV SELLSHNTKL TPMEFGNLQK MDDPTDQCQD
260 270 280 290 300
PVPEPPRNCS TGFGICEELL HGQLFSGCVA LVDVGSYLEA CRQDLCFCED
310 320 330 340 350
TDLLSCVCHT LAEYSRQCTH AGGLPQDWRG PDFCPQKCPN NMQYHECRSP
360 370 380 390 400
CADTCSNQEH SRACEDHCVA GCFCPEGTVL DDIGQTGCVP VSKCACVYNG
410 420 430 440 450
AAYAPGATYS TDCTNCTCSG GRWSCQEVPC PGTCSVLGGA HFSTFDGKQY
460 470 480 490 500
TVHGDCSYVL TKPCDSSAFT VLAELRRCGL TDSETCLKSV TLSLDGAQTV
510 520 530 540 550
VVIKASGEVF LNQIYTQLPI SAANVTIFRP STFFIIAQTS LGLQLNLQLV
560 570 580 590 600
PTMQLFMQLA PKLRGQTCGL CGNFNSIQAD DFRTLSGVVE ATAAAFFNTF
610 620 630 640 650
KTQAACPNIR NSFEDPCSLS VENEKYAQHW CSQLTDADGP FGRCHAAVKP
660 670 680 690 700
GTYYSNCMFD TCNCERSEDC LCAALSSYVH ACAAKGVQLG GWRDGVCTKP
710 720 730 740 750
MTTCPKSMTY HYHVSTCQPT CRSLSEGDIT CSVGFIPVDG CICPKGTFLD
760 770 780 790 800
DTGKCVQASN CPCYHRGSMI PNGESVHDSG AICTCTHGKL SCIGGQAPAP
810 820 830 840 850
VCAAPMVFFD CRNATPGDTG AGCQKSCHTL DMTCYSPQCV PGCVCPDGLV
860 870 880 890 900
ADGEGGCITA EDCPCVHNEA SYRAGQTIRV GCNTCTCDSR MWRCTDDPCL
910 920 930 940 950
ATCAVYGDGH YLTFDGQSYS FNGDCEYTLV QNHCGGKDST QDSFRVVTEN
960 970 980 990 1000
VPCGTTGTTC SKAIKIFLGG FELKLSHGKV EVIGTDESQE VPYTIRQMGI
1010 1020 1030 1040 1050
YLVVDTDIGL VLLWDKKTSI FINLSPEFKG RVCGLCGNFD DIAVNDFATR
1060 1070 1080 1090 1100
SRSVVGDVLE FGNSWKLSPS CPDALAPKDP CTANPFRKSW AQKQCSILHG
1110 1120 1130 1140 1150
PTFAACHAHV EPARYYEACV NDACACDSGG DCECFCTAVA AYAQACHEVG
1160 1170 1180 1190 1200
LCVSWRTPSI CPLFCDYYNP EGQCEWHYQP CGVPCLRTCR NPRGDCLRDV
1210 1220 1230 1240 1250
RGLEGCYPKC PPEAPIFDED KMQCVATCPT PPLPPRCHVH GKSYRPGAVV
1260 1270 1280 1290 1300
PSDKNCQSCL CTERGVECTY KAEACVCTYN GQRFHPGDVI YHTTDGTGGC
1310 1320 1330 1340 1350
ISARCGANGT IERRVYPCSP TTPVPPTTFS FSTPPLVVSS THTPSNGPSS
1360 1370 1380 1390 1400
AHTGPPSSAW PTTAGTSPRT RLPTASASLP PVCGEKCLWS PWMDVSRPGR
1410 1420 1430 1440 1450
GTDSGDFDTL ENLRAHGYRV CESPRSVECR AEDAPGVPLR ALGQRVQCSP
1460 1470 1480 1490 1500
DVGLTCRNRE QASGLCYNYQ IRVQCCTPLP CSTSSSPAQT TPPTTSKTTE
1510 1520 1530 1540 1550
TRASGSSAPS STPGTVSLST ARTTPAPGTA TSVKKTFSTP SPPPVPATST
1560 1570 1580 1590 1600
SSMSTTAPGT SVVSSKPTPT EPSTSSCLQE LCTWTEWIDG SYPAPGINGG
1610 1620 1630 1640 1650
DFDTFQNLRD EGYTFCESPR SVQCRAESFP NTPLADLGQD VICSHTEGLI
1660 1670 1680 1690 1700
CLNKNQLPPI CYNYEIRIQC CETVNVCRDI TRLPKTVATT RPTPHPTGAQ
1710 1720 1730 1740 1750
TQTTFTTHMP SASTEQPTAT SRGGPTATSV TQGTHTTLVT RNCHPRCTWT
1760 1770 1780 1790 1800
KWFDVDFPSP GPHGGDKETY NNIIRSGEKI CRRPEEITRL QCRAKSHPEV
1810 1820 1830 1840 1850
SIEHLGQVVQ CSREEGLVCR NQDQQGPFKM CLNYEVRVLC CETPRGCHMT
1860 1870 1880 1890 1900
STPGSTSSSP AQTTPSTTSK TTETQASGSS APSSTPGTVS LSTARTTPAP
1910 1920 1930 1940 1950
GTATSVKKTF STPSPPPVPA TSTSSMSTTA PGTSVVSSKP TPTEPSTSSC
1960 1970 1980 1990 2000
LQELCTWTEW IDGSYPAPGI NGGDFDTFQN LRDEGYTFCE SPRSVQCRAE
2010 2020 2030 2040 2050
SFPNTPLADL GQDVICSHTE GLICLNKNQL PPICYNYEIR IQCCETVNVC
2060 2070 2080 2090 2100
RDITRPPKTV ATTRPTPHPT GAQTQTTFTT HMPSASTEQP TATSRGGPTA
2110 2120 2130 2140 2150
TSVTQGTHTT PVTRNCHPRC TWTTWFDVDF PSPGPHGGDK ETYNNIIRSG
2160 2170 2180 2190 2200
EKICRRPEEI TRLQCRAKSH PEVSIEHLGQ VVQCSREEGL VCRNQDQQGP
2210 2220 2230 2240 2250
FKMCLNYEVR VLCCETPKGC PVTSTPVTAP STPSGRATSP TQSTSSWQKS
2260 2270 2280 2290 2300
RTTTLVTTST TSTPQTSTTY AHTTSTTSAP TARTTSAPTT RTTSASPAST
2310 2320 2330 2340 2350
TSGPGNTPSP VPTTSTISAP TTSITSAPTT STTSAPTSST TSGPGTTPSP
2360 2370 2380 2390 2400
VPTTSITSAP TTSTTSAPTT STTSARTSST TSATTTSRIS GPETTPSPVP
2410 2420 2430 2440 2450
TTSTTSATTT STTSAPTTST TSAPTSSTTS SPQTSTTSAP TTSTTSGPGT
2460 2470 2480 2490 2500
TPSPVPTTST TSAPTTRTTS APKSSTTSAA TTSTTSGPET TPRPVPTTST
2510 2520 2530 2540 2550
TSSPTTSTTS APTTSTTSAS TTSTTSGAGT TPSPVPTTST TSAPTTSTTS
2560 2570 2580 2590 2600
APISSTTSAT TTSTTSGPGT TPSPVPTTST TSAPTTSTTS GPGTTPSAVP
2610 2620 2630 2640 2650
TTSITSAPTT STNSAPISST TSATTTSRIS GPETTPSPVP TASTTSASTT
2660 2670 2680 2690 2700
STTSGPGTTP SPVPTTSTIS VPTTSTTSAS TTSTTSASTT STTSGPGTTP
2710 2720 2730 2740 2750
SPVPTTSTTS APTTSTTSAP TTSTISAPTT STTSATTTST TSAPTPRRTS
2760 2770 2780 2790 2800
APTTSTISAS TTSTTSATTT STTSATTTST ISAPTTSTTL SPTTSTTSTT
2810 2820 2830 2840 2850
ITSTTSAPIS STTSTPQTST TSAPTTSTTS GPGTTSSPVP TTSTTSAPTT
2860 2870 2880 2890 2900
STTSAPTTRT TSVPTSSTTS TATTSTTSGP GTTPSPVPTT STTSAPTTRT
2910 2920 2930 2940 2950
TSAPTTSTTS APTTSTTSAP TSSTTSATTT STISVPTTST TSVPGTTPSP
2960 2970 2980 2990 3000
VPTTSTISVP TTSTTSASTT STTSGPGTTP SPVPTTSTTS APTTSTTSAP
3010 3020 3030 3040 3050
TTSTISAPTT STPSAPTTST TLAPTTSTTS APTTSTTSTP TSSTTSSPQT
3060 3070 3080 3090 3100
STTSASTTSI TSGPGTTPSP VPTTSTTSAP TTSTTSAATT STISAPTTST
3110 3120 3130 3140 3150
TSAPTTSTTS ASTASKTSGL GTTPSPIPTT STTSPPTTST TSASTASKTS
3160 3170 3180 3190 3200
GPGTTPSPVP TTSTIFAPRT STTSASTTST TPGPGTTPSP VPTTSTASVS
3210 3220 3230 3240 3250
KTSTSHVSIS KTTHSQPVTR DCHLRCTWTK WFDIDFPSPG PHGGDKETYN
3260 3270 3280 3290 3300
NIIRSGEKIC RRPEEITRLQ CRAESHPEVS IEHLGQVVQC SREEGLVCRN
3310 3320 3330 3340 3350
QDQQGPFKMC LNYEVRVLCC ETPKGCPVTS TPVTAPSTPS GRATSPTQST
3360 3370 3380 3390 3400
SSWQKSRTTT LVTTSTTSTP QTSTTSAPTT STTSAPTTST TSAPTTSTTS
3410 3420 3430 3440 3450
TPQTSISSAP TSSTTSAPTS STISARTTSI ISAPTTSTTS SPTTSTTSAT
3460 3470 3480 3490 3500
TTSTTSAPTS STTSTPQTSK TSAATSSTTS GSGTTPSPVT TTSTASVSKT
3510 3520 3530 3540 3550
STSHVSVSKT THSQPVTRDC HPRCTWTKWF DVDFPSPGPH GGDKETYNNI
3560 3570 3580 3590 3600
IRSGEKICRR PEEITRLQCR AKSHPEVSIE HLGQVVQCSR EEGLVCRNQD
3610 3620 3630 3640 3650
QQGPFKMCLN YEVRVLCCET PKGCPVTSTS VTAPSTPSGR ATSPTQSTSS
3660 3670 3680 3690 3700
WQKSRTTTLV TSSITSTTQT STTSAPTTST TPASIPSTTS APTTSTTSAP
3710 3720 3730 3740 3750
TTSTTSAPTT STTSTPQTTT SSAPTSSTTS APTTSTISAP TTSTISAPTT
3760 3770 3780 3790 3800
STTSAPTAST TSAPTSTSSA PTTNTTSAPT TSTTSAPITS TISAPTTSTT
3810 3820 3830 3840 3850
STPQTSTISS PTTSTTSTPQ TSTTSSPTTS TTSAPTTSTT SAPTTSTTST
3860 3870 3880 3890 3900
PQTSISSAPT SSTTSAPTAS TISAPTTSTT SFHTTSTTSP PTSSTSSTPQ
3910 3920 3930 3940 3950
TSKTSAATSS TTSGSGTTPS PVPTTSTASV SKTSTSHVSV SKTTHSQPVT
3960 3970 3980 3990 4000
RDCHPRCTWT KWFDVDFPSP GPHGGDKETY NNIIRSGEKI CRRPEEITRL
4010 4020 4030 4040 4050
QCRAESHPEV SIEHLGQVVQ CSREEGLVCR NQDQQGPFKM CLNYEVRVLC
4060 4070 4080 4090 4100
CETPKGCPVT STPVTAPSTP SGRATSPTQS TSSWQKSRTT TLVTTSTTST
4110 4120 4130 4140 4150
PQTSTTSAPT TSTIPASTPS TTSAPTTSTT SAPTTSTTSA PTHRTTSGPT
4160 4170 4180 4190 4200
TSTTLAPTTS TTSAPTTSTN SAPTTSTISA STTSTISAPT TSTISSPTSS
4210 4220 4230 4240 4250
TTSTPQTSKT SAATSSTTSG SGTTPSPVPT TSTTSASTTS TTSAPTTSTT
4260 4270 4280 4290 4300
SGPGTTPSPV PSTSTTSAAT TSTTSAPTTR TTSAPTSSMT SGPGTTPSPV
4310 4320 4330 4340 4350
PTTSTTSAPT TSTTSGPGTT PSPVPTTSTT SAPITSTTSG PGSTPSPVPT
4360 4370 4380 4390 4400
TSTTSAPTTS TTSASTASTT SGPGTTPSPV PTTSTTSAPT TRTTSASTAS
4410 4420 4430 4440 4450
TTSGPGSTPS PVPTTSTTSA PTTRTTPAST ASTTSGPGTT PSPVPTTSTT
4460 4470 4480 4490 4500
SASTTSTISL PTTSTTSAPI TSMTSGPGTT PSPVPTTSTT SAPTTSTTSA
4510 4520 4530 4540 4550
STASTTSGPG TTPSPVPTTS TTSAPTTSTT SASTASTTSG PGTSLSPVPT
4560 4570 4580 4590 4600
TSTTSAPTTS TTSGPGTTPS PVPTTSTTSA PTTSTTSGPG TTPSPVPTTS
4610 4620 4630 4640 4650
TTPVSKTSTS HLSVSKTTHS QPVTSDCHPL CAWTKWFDVD FPSPGPHGGD
4660 4670 4680 4690 4700
KETYNNIIRS GEKICRRPEE ITRLQCRAES HPEVNIEHLG QVVQCSREEG
4710 4720 4730 4740 4750
LVCRNQDQQG PFKMCLNYEV RVLCCETPRG CPVTSVTPYG TSPTNALYPS
4760 4770 4780 4790 4800
LSTSMVSASV ASTSVASSSV ASSSVAYSTQ TCFCNVADRL YPAGSTIYRH
4810 4820 4830 4840 4850
RDLAGHCYYA LCSQDCQVVR GVDSDCPSTT LPPAPATSPS ISTSEPVTEL
4860 4870 4880 4890 4900
GCPNAVPPRK KGETWATPNC SEATCEGNNV ISLRPRTCPR VEKPTCANGY
4910 4920 4930 4940 4950
PAVKVADQDG CCHHYQCQCV CSGWGDPHYI TFDGTYYTFL DNCTYVLVQQ
4960 4970 4980 4990 5000
IVPVYGHFRV LVDNYFCGAE DGLSCPRSII LEYHQDRVVL TRKPVHGVMT
5010 5020 5030 5040 5050
NEIIFNNKVV SPGFRKNGIV VSRIGVKMYA TIPELGVQVM FSGLIFSVEV
5060 5070 5080 5090 5100
PFSKFANNTE GQCGTCTNDR KDECRTPRGT VVASCSEMSG LWNVSIPDQP
5110 5120 5130 5140 5150
ACHRPHPTPT TVGPTTVGST TVGPTTVGST TVGPTTPPAP CLPSPICQLI
5160 5170 5180 5190 5200
LSKVFEPCHT VIPPLLFYEG CVFDRCHMTD LDVVCSSLEL YAALCASHDI
5210 5220 5230 5240 5250
CIDWRGRTGH MCPFTCPADK VYQPCGPSNP SYCYGNDSAS LGALPEAGPI
5260 5270 5280 5290 5300
TEGCFCPEGM TLFSTSAQVC VPTGCPRCLG PHGEPVKVGH TVGMDCQECT
5310 5320 5330 5340 5350
CEAATWTLTC RPKLCPLPPA CPLPGFVPVP AAPQAGQCCP QYSCACNTSR
5360 5370 5380 5390 5400
CPAPVGCPEG ARAIPTYQEG ACCPVQNCSW TVCSINGTLY QPGAVVSSSL
5410 5420 5430 5440 5450
CETCRCELPG GPPSDAFVVS CETQICNTHC PVGFEYQEQS GQCCGTCVQV
5460 5470 5480 5490 5500
ACVTNTSKSP AHLFYPGETW SDAGNHCVTH QCEKHQDGLV VVTTKKACPP
5510 5520 5530 5540 5550
LSCSLDEARM SKDGCCRFCP PPPPPYQNQS TCAVYHRSLI IQQQGCSSSE
5560 5570 5580 5590 5600
PVRLAYCRGN CGDSSSMYSL EGNTVEHRCQ CCQELRTSLR NVTLHCTDGS
5610 5620 5630 5640 5650
SRAFSYTEVE ECGCMGRRCP APGDTQHSEE AEPEPSQEAE SGSWERGVPV

SPMH
Length:5,654
Mass (Da):585,570
Last modified:April 1, 2015 - v4
Checksum:i13217A8257E8E2DE
GO

Sequence cautioni

The sequence AAA18431.1 differs from that shown. Reason: Frameshift at several positions. Curated
The sequence AAA18431.1 differs from that shown. Reason: Erroneous termination at position 4999. Translated as Met.Curated
The sequence AAC15950.1 differs from that shown. Reason: Frameshift at positions 24, 44, 671 and 683. Curated
The sequence CAA88307.1 differs from that shown. Reason: Frameshift at position 5649. Curated
The sequence CAH56330.1 differs from that shown. Reason: Frameshift at positions 5240, 5247 and 5253. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti25 – 251G → S in AAC15950 (PubMed:9506983).Curated
Sequence conflicti221 – 2211S → R in AAC15950 (PubMed:9506983).Curated
Sequence conflicti246 – 2461D → E in CAC83674 (PubMed:11535137).Curated
Sequence conflicti246 – 2461D → E in AAC15950 (PubMed:9506983).Curated
Sequence conflicti432 – 4321G → D in CAC83674 (PubMed:11535137).Curated
Sequence conflicti549 – 5491L → P in CAC83674 (PubMed:11535137).Curated
Sequence conflicti658 – 6581M → V in CAC83674 (PubMed:11535137).Curated
Sequence conflicti702 – 7021T → I in AAC15950 (PubMed:9506983).Curated
Sequence conflicti716 – 7161T → A in AAC15950 (PubMed:9506983).Curated
Sequence conflicti817 – 8182GD → RG in AAC15950 (PubMed:9506983).Curated
Sequence conflicti869 – 8691E → K in AAC15950 (PubMed:9506983).Curated
Sequence conflicti978 – 9781G → R in AAC15950 (PubMed:9506983).Curated
Sequence conflicti996 – 9961R → Q in CAC83674 (PubMed:11535137).Curated
Sequence conflicti1141 – 11411A → R in CAA57309 (PubMed:8948439).Curated
Sequence conflicti1151 – 11555LCVSW → TCVCL in CAA57309 (PubMed:8948439).Curated
Sequence conflicti1154 – 11552SW → CL in CAC83674 (PubMed:11535137).Curated
Sequence conflicti1480 – 14801P → A in CAA57309 (PubMed:8948439).Curated
Sequence conflicti1683 – 16831L → P in CAA57309 (PubMed:8948439).Curated
Sequence conflicti1738 – 17381L → P in CAA57309 (PubMed:8948439).Curated
Sequence conflicti1790 – 17901L → V in CAC83674 (PubMed:11535137).Curated
Sequence conflicti1790 – 17901L → V in CAA57309 (PubMed:8948439).Curated
Sequence conflicti1803 – 18031E → N AA sequence (PubMed:2656675).Curated
Sequence conflicti1874 – 18741T → I in CAC83674 (PubMed:11535137).Curated
Sequence conflicti2008 – 20092AD → GR in CAC83674 (PubMed:11535137).Curated
Sequence conflicti2176 – 21761E → N AA sequence (PubMed:2656675).Curated
Sequence conflicti2207 – 22071Y → I in CAC83674 (PubMed:11535137).Curated
Sequence conflicti2238 – 22381T → I in CAC83674 (PubMed:11535137).Curated
Sequence conflicti2289 – 42371949Missing in CAC83674 (PubMed:11535137).CuratedAdd
BLAST
Sequence conflicti3047 – 30471S → T in CAC83675 (PubMed:11535137).Curated
Sequence conflicti3088 – 30881A → S in CAC83676 (PubMed:11535137).Curated
Sequence conflicti3095 – 30962AP → PL in CAC83676 (PubMed:11535137).Curated
Sequence conflicti3105 – 31051T → I in CAC83676 (PubMed:11535137).Curated
Sequence conflicti3107 – 42871181Missing in CAC83676 (PubMed:11535137).CuratedAdd
BLAST
Sequence conflicti3234 – 32341I → V in CAC83675 (PubMed:11535137).Curated
Sequence conflicti3481 – 34811G → S in CAC83675 (PubMed:11535137).Curated
Sequence conflicti3562 – 35621E → Q in CAC83675 (PubMed:11535137).Curated
Sequence conflicti3580 – 35801E → N AA sequence (PubMed:2656675).Curated
Sequence conflicti3636 – 36449TPSGRATSP → PLVGEPPAQ in CAC83675 (PubMed:11535137).Curated
Sequence conflicti3817 – 38171S → P in CAC83675 (PubMed:11535137).Curated
Sequence conflicti4244 – 42441A → V in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4250 – 42545TSGPG → ISGPK in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4262 – 42621S → T in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4265 – 42651T → I in CAC83675 (PubMed:11535137).Curated
Sequence conflicti4274 – 42741T → I in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4280 – 42845RTTSA → STTSV in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4286 – 437388Missing in CAC83674 (PubMed:11535137).CuratedAdd
BLAST
Sequence conflicti4290 – 42901T → P in CAC83676 (PubMed:11535137).Curated
Sequence conflicti4314 – 4473160Missing in CAC83676 (PubMed:11535137).CuratedAdd
BLAST
Sequence conflicti4381 – 43811P → L in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4398 – 44003TAS → PAG in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4407 – 44071S → N in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4418 – 44181T → I in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4421 – 448464Missing in CAC83674 (PubMed:11535137).CuratedAdd
BLAST
Sequence conflicti4489 – 44891T → I in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4501 – 45033STA → PTS in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4521 – 45211T → I in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4533 – 457240Missing in CAC83674 (PubMed:11535137).CuratedAdd
BLAST
Sequence conflicti4588 – 45881G → A in CAC83674 (PubMed:11535137).Curated
Sequence conflicti4614 – 46152VS → HE in AAA18431 (PubMed:7513696).Curated
Sequence conflicti4827 – 48271P → R in CAA88307 (PubMed:7775418).Curated
Sequence conflicti4884 – 48841R → S in CAA04737 (PubMed:9620876).Curated
Sequence conflicti4884 – 48841R → S in CAA04738 (PubMed:9620876).Curated
Sequence conflicti4884 – 48841R → S in CAA88307 (PubMed:7775418).Curated
Sequence conflicti4886 – 48861R → P in AAA18431 (PubMed:7513696).Curated
Sequence conflicti4899 – 48991G → A in AAA18431 (PubMed:7513696).Curated
Sequence conflicti4946 – 49472VL → AW in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5013 – 50131G → A in CAA88307 (PubMed:7775418).Curated
Sequence conflicti5081 – 50844VVAS → HASA in AAH33831 (PubMed:15489334).Curated
Sequence conflicti5148 – 51481Q → H in CAA88307 (PubMed:7775418).Curated
Sequence conflicti5148 – 51481Q → H in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5209 – 52102GH → RD in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5245 – 52451P → R in CAA04737 (PubMed:9620876).Curated
Sequence conflicti5245 – 52451P → R in CAA04738 (PubMed:9620876).Curated
Sequence conflicti5245 – 52451P → R in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5264 – 52641S → T in CAA04737 (PubMed:9620876).Curated
Sequence conflicti5264 – 52641S → T in CAA04738 (PubMed:9620876).Curated
Sequence conflicti5356 – 53561G → R in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5363 – 53631A → R in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5433 – 54331G → R in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5441 – 54411G → A in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5546 – 55461C → S in AAA18431 (PubMed:7513696).Curated
Sequence conflicti5622 – 56221P → A in AAA18431 (PubMed:7513696).Curated

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti5521 – 55211P → L.2 Publications
Corresponds to variant rs1132436 [ dbSNP | Ensembl ].
VAR_036832

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO680660 Genomic DNA. No translation available.
FP326773 Genomic DNA. No translation available.
KC800812 Genomic DNA. No translation available.
AJ298317 mRNA. Translation: CAC83674.1.
AJ298318 Genomic DNA. Translation: CAC83675.1.
AJ298319 Genomic DNA. Translation: CAC83676.1.
AF015521 mRNA. Translation: AAC15950.1. Frameshift.
X81649 mRNA. Translation: CAA57309.1.
AJ001402 mRNA. Translation: CAA04737.1.
AJ001403 Genomic DNA. Translation: CAA04738.1.
U06711 mRNA. Translation: AAA18431.1. Sequence problems.
Z48314 mRNA. Translation: CAA88307.1. Frameshift.
BC033831 mRNA. Translation: AAH33831.1.
AL833060 mRNA. Translation: CAH56330.1. Frameshift.
PIRiA33811.
JE0095.
UniGeneiHs.534332.
Hs.558950.
Hs.721515.

Genome annotation databases

EnsembliENST00000621226; ENSP00000485659; ENSG00000215182.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Web resourcesi

Mucin database
Atlas of Genetics and Cytogenetics in Oncology and Haematology

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO680660 Genomic DNA. No translation available.
FP326773 Genomic DNA. No translation available.
KC800812 Genomic DNA. No translation available.
AJ298317 mRNA. Translation: CAC83674.1.
AJ298318 Genomic DNA. Translation: CAC83675.1.
AJ298319 Genomic DNA. Translation: CAC83676.1.
AF015521 mRNA. Translation: AAC15950.1. Frameshift.
X81649 mRNA. Translation: CAA57309.1.
AJ001402 mRNA. Translation: CAA04737.1.
AJ001403 Genomic DNA. Translation: CAA04738.1.
U06711 mRNA. Translation: AAA18431.1. Sequence problems.
Z48314 mRNA. Translation: CAA88307.1. Frameshift.
BC033831 mRNA. Translation: AAH33831.1.
AL833060 mRNA. Translation: CAH56330.1. Frameshift.
PIRiA33811.
JE0095.
UniGeneiHs.534332.
Hs.558950.
Hs.721515.

3D structure databases

ProteinModelPortaliP98088.
SMRiP98088. Positions 336-394, 800-873, 4589-4652, 4903-4994.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP98088. 1 interaction.

Protein family/group databases

MEROPSiI08.951.

PTM databases

UniCarbKBiP98088.

Polymorphism and mutation databases

DMDMi160370004.

Proteomic databases

MaxQBiP98088.
PRIDEiP98088.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000621226; ENSP00000485659; ENSG00000215182.

Organism-specific databases

GeneCardsiGC11P001151.
H-InvDBHIX0201650.
HGNCiHGNC:7515. MUC5AC.
HPAiHPA040456.
HPA040615.
MIMi158373. gene.
neXtProtiNX_P98088.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00760000118896.
InParanoidiP98088.

Enzyme and pathway databases

ReactomeiREACT_115606. O-linked glycosylation of mucins.
REACT_115835. Termination of O-glycan biosynthesis.

Miscellaneous databases

NextBioi125477.
PROiP98088.
SOURCEiSearch...

Gene expression databases

GenevestigatoriP98088.

Family and domain databases

InterProiIPR006207. Cys_knot_C.
IPR002919. TIL_dom.
IPR014853. Unchr_dom_Cys-rich.
IPR006552. VWC_out.
IPR001007. VWF_C.
IPR001846. VWF_type-D.
IPR025155. WxxW_domain.
[Graphical view]
PfamiPF08742. C8. 4 hits.
PF13330. Mucin2_WxxW. 9 hits.
PF01826. TIL. 3 hits.
PF00094. VWD. 4 hits.
[Graphical view]
SMARTiSM00832. C8. 4 hits.
SM00041. CT. 1 hit.
SM00214. VWC. 6 hits.
SM00215. VWC_out. 2 hits.
SM00216. VWD. 4 hits.
[Graphical view]
SUPFAMiSSF57567. SSF57567. 4 hits.
PROSITEiPS01185. CTCK_1. 1 hit.
PS01225. CTCK_2. 1 hit.
PS01208. VWFC_1. 2 hits.
PS50184. VWFC_2. 2 hits.
PS51233. VWFD. 4 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Human mucin gene MUC5AC: organization of its 5'-region and central repetitive region."
    Escande F., Aubert J.-P., Porchet N., Buisine M.P.
    Biochem. J. 358:763-772(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-4589, NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 3025-4373, NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 3081-4793.
  3. "Cloning of the amino-terminal and 5'-flanking region of the human MUC5AC mucin gene and transcriptional up-regulation by bacterial exoproducts."
    Li D., Gallup M., Fan N., Szymkowski D.E., Basbaum C.B.
    J. Biol. Chem. 273:6812-6820(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-1104.
    Tissue: Trachea.
  4. "Cloning and analysis of human gastric mucin cDNA reveals two types of conserved cysteine-rich domains."
    Klomp L.W., Van Rens L., Strous G.J.
    Biochem. J. 308:831-838(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1005-1854.
  5. "Proteolytic fragmentation and peptide mapping of human carboxyamidomethylated tracheobronchial mucin."
    Rose M.C., Kaufman B., Martin B.M.
    J. Biol. Chem. 264:8193-8199(1989) [PubMed] [Europe PMC] [Abstract]
    Tissue: Tracheobronchial mucosa.
  6. "Genomic organization of the 3'-region of the human MUC5AC mucin gene: additional evidence for a common ancestral gene for the 11p15.5 mucin gene family."
    Buisine M.P., Desseyn J.-L., Porchet N., Degand P., Laine A., Aubert J.-P.
    Biochem. J. 332:729-738(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] OF 4574-5654.
    Tissue: Placenta and Trachea.
  7. "Cloning and analysis of cDNA encoding a major airway glycoprotein, human tracheobronchial mucin (MUC5)."
    Meerzaman D., Charles P., Daskal E., Polymeropoulos M.H., Martin B.M., Rose M.C.
    J. Biol. Chem. 269:12932-12939(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 4614-5654, PARTIAL PROTEIN SEQUENCE, TISSUE SPECIFICITY, VARIANT LEU-5521.
    Tissue: Nasal polyp.
  8. "Characterization of a mucin cDNA clone isolated from HT-29 mucus secreting cells: the 3' end of MUC5AC?"
    Lesuffleur T., Roche F., Hill A.S., Lacasa M., Fox M., Swallow D.M., Zweibaum A., Real F.X.
    J. Biol. Chem. 270:13665-13673(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 4705-5654, VARIANT LEU-5521.
  9. "Cleavage in the GDPH sequence of the C-terminal cysteine-rich part of the human MUC5AC mucin."
    Lidell M.E., Hansson G.C.
    Biochem. J. 399:121-129(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 4927-4936, PROTEOLYTIC PROCESSING, MUTAGENESIS OF ASP-4926.
  10. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 5081-5654.
    Tissue: Colon.
  11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 5193-5654, VARIANT LEU-5521.
    Tissue: Stomach.
  12. Cited for: STRUCTURE OF O-LINKED CARBOHYDRATES.
  13. "The MUC5AC glycoprotein is the primary receptor for Helicobacter pylori in the human stomach."
    Van de Bovenkamp J.H., Mahdavi J., Korteland-Van Male A.M., Bueller H.A., Einerhand A.W., Boren T., Dekker J.
    Helicobacter 8:521-532(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION AS LEWIS B BLOOD GROUP ANTIGEN, TISSUE SPECIFICITY, INTERACTION WITH HELICOBACTER PYLORI.
  14. "C-Mannosylation of MUC5AC and MUC5B Cys subdomains."
    Perez-Vilar J., Randell S.H., Boucher R.C.
    Glycobiology 14:325-337(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: GLYCOSYLATION AT TRP-2122, SUBCELLULAR LOCATION, MUTAGENESIS OF TRP-2122.

Entry informationi

Entry nameiMUC5A_HUMAN
AccessioniPrimary (citable) accession number: P98088
Secondary accession number(s): A0A096LPK4
, O60460, O76065, Q13792, Q14425, Q658Q1, Q7M4S5, Q8N4M9, Q8WWQ3, Q8WWQ4, Q8WWQ5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: April 1, 2015
Last modified: April 29, 2015
This is version 135 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.