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Protein
Submitted name:

Sp1-like zinc finger protein

Gene

Klf10

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Sp1-like zinc finger proteinImported
Gene namesi
Name:Klf10Imported
Synonyms:TIEGImported, TiegImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi621652. Klf10.

PTM / Processingi

Proteomic databases

PaxDbiP97848.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008350.

Structurei

3D structure databases

ProteinModelPortaliP97848.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini353 – 382C2H2-typeInterPro annotationAdd BLAST30
Domaini383 – 412C2H2-typeInterPro annotationAdd BLAST30
Domaini413 – 440C2H2-typeInterPro annotationAdd BLAST28

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000059558.
HOVERGENiHBG052264.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P97848-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELISEKSKE GAHPWDKAEQ SDFEAVEALM SMSCDWKSHF KKYLENRPVT
60 70 80 90 100
PVSDTSEEDS LLPGTPDLQT VPAFCLTPPY SPSDFEPSQG SNLTAPAPPT
110 120 130 140 150
GHFRSLSDAA KPPSIAPFKE EEKSPLAAPP LPKAQATSVI RHTADAQLCN
160 170 180 190 200
HQSCPVKAAS ILNYQDNSFR RRTHINVEAT RKNIPCAAVS PNRPKSEPST
210 220 230 240 250
AANGAEKAGT APYDFAVPSS ETVICRSSQP APTSPVQNSV LMSSPTVSTG
260 270 280 290 300
GVPPLPVICQ MVPLPANNSL VTTVVPSSPP SQPPAVCSPV LFMHSVPKGT
310 320 330 340 350
VMFVVPQPVV QSPKPPVVSP NGTRLSPIAP APGFSPSAAR VTPQIDSSRV
360 370 380 390 400
SCHICSHPGC GKTYFKSSHL KAHVRTHTGE KPFSCSWKGC ERRFARSDEL
410 420 430 440 450
SRHRRTHTGE KKFACPMCDR RFMRSDHLTK HARRHLSAKK LPNWQMEVSK
460
LNDIALPPAT ASAQ
Length:464
Mass (Da):50,127
Last modified:May 1, 1997 - v1
Checksum:i6B9974F20D6C1F0E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U88630 mRNA. Translation: AAB48512.1.
UniGeneiRn.2398.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U88630 mRNA. Translation: AAB48512.1.
UniGeneiRn.2398.

3D structure databases

ProteinModelPortaliP97848.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008350.

Proteomic databases

PaxDbiP97848.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi621652. Klf10.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000059558.
HOVERGENiHBG052264.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP97848_RAT
AccessioniPrimary (citable) accession number: P97848
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: October 5, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.