P97559 (P97559_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tap1 protein EMBL CAA71281.1

Gene names

Name:	Tap1 RGD 3817
Synonyms:	tap1 EMBL CAA71281.1

Organism

Rattus norvegicus (Rat) EMBL CAA71281.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	725 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU003299 Nucleotide-binding
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity, coupled to transmembrane movement of substances Inferred from electronic annotation. Source: InterPro peptide transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P97559 [UniParc]. Last modified May 1, 1997. Version 1. Checksum: 32D36CE0006A3C39	FASTA	725	79,234
	10 20 30 40 50 60 MAAHAWPTAA LLLLLVDWLL LRPVLPGIFS LLVPEVPLLR VWAVGLSRWA ILGLGVRGVL 70 80 90 100 110 120 GVTAGARGWL AALQPLVAAL GLALPGLASF RKLAAWGALR EGDNAGLLHW NSRLDAFVLS 130 140 150 160 170 180 YVAALPAAAL WHKLGGFWAP SGHKGAGDML CRMLGFLDSK KGRLHLVLVL LILSCLGEMA 190 200 210 220 230 240 IPFFTGRITD WILQDKTAPS FARNMWLMCI LTIASTALEF AGDGIYNITM GHMHSRVHGE 250 260 270 280 290 300 VFRAVLHQET GFFLKNPTGS ITSRVTEDTS NVCESISDKL NLFLWYLGRG LCLLAFMIWG 310 320 330 340 350 360 SFYLTVVTLL SLPLLFLLPR RLGKVYQSLA VKVQESLAKS TQVALEALSA MPTVRSFANE 370 380 390 400 410 420 EGEAQKFRQK LEEMKPLNKK EALAYVTEVW TMSVSGMLLK VGILYLGGQL VVRGAVSSGN 430 440 450 460 470 480 LVSFVLYQLQ FTRAVEVLLS IYPSMQKSVG ASEKIFEYLD RTPCSPLSGS LAPLNMKGLV 490 500 510 520 530 540 KFQDVSFAYP NHPNVQVLQG LTFTLYPGKV TALVGPNGSG KSTVAALLQN LYQPTRGKVL 550 560 570 580 590 600 LDGEPLVQYD HHYLHTQVAA VGQEPLLFGR SFRENIAYGL TRTPTMEEIT AVAMESGAHD 610 620 630 640 650 660 FISGFPQGYD TEVGETGNQL SGGQRQAVAL ARALIRKPRL LILDDATSAL DAGNQLRVQR 670 680 690 700 710 720 LLYESPEWAS RTVLLITQQL SLAERAHHIL FLKEGSVCEQ GTHLQLMERG GCYRSMVEAL AVPSD

References

[1]	Deverson E.V. Submitted (DEC-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: SHR EMBL CAA71281.1. Tissue: Activated lymphocytes EMBL CAA71281.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Y10232 mRNA. Translation: CAA71281.1.
IPI	IPI00327166.
UniGene	Rn.10763.
3D structure databases
HSSP	HSSP built from PDB template 1JJ7 based on UniProtKB Q03518.
ProteinModelPortal	P97559.
SMR	P97559. Positions 465-719.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOVERGEN	HBG008358.
InParanoid	P97559.
Gene expression databases
Genevestigator	P97559.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR013305. ABC_B2. IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR017940. ABC_transporter_type1. IPR001140. ABC_transptr_TM_dom. IPR011527. ABC_transptrTM_dom_typ1. IPR005293. Ag_transporter2. [Graphical view]
Pfam	PF00664. ABC_membrane. 1 hit. PF00005. ABC_tran. 1 hit. [Graphical view]
PRINTS	PR01896. TAP1PROTEIN.
SMART	SM00382. AAA. 1 hit. [Graphical view]
SUPFAM	SSF90123. ABC_TM_1. 1 hit.
TIGRFAMs	TIGR00958. 3a01208. 1 hit.
PROSITE	PS50929. ABC_TM1F. 1 hit. PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

P97559_RAT

Accession

Primary (citable) accession number: P97559

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	April 3, 2013
This is version 81 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)