Skip Header

Contribute Send feedback
Read comments (?) or add your own

P96992 (P96992_STRLI) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
AmlC protein EMBL CAB06816.1
Gene names
Name:amlC EMBL CAB06816.1
OrganismStreptomyces lividans EMBL CAB06816.1
Taxonomic identifier1916 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length993 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 fibronectin type-III domain. RuleBase RU000718

Ontologies

Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
P96992 [UniParc].

Last modified June 1, 1998. Version 3.
Checksum: 48C2855453C5BD00

FASTA993107,055
        10         20         30         40         50         60 
MRWLGRPLTV AVAVAAVLSA VPAPPAASPA ADPAAAAAEP GNTATVFYYT KTKNWDRYNL 

        70         80         90        100        110        120 
HYAPDGGSWT EVPGVAMEAA CTDWVKRTVP LGSAEGLRAT FNNGSGTWDN NGGENYALGT 

       130        140        150        160        170        180 
GALTVKDGVV AHSDPCAGGQ DPGPTPGDGN RATVYYSTRT LGWTTANIHY RPAGGSWTAV 

       190        200        210        220        230        240 
PGVGMRAACA GWWKKDVDLG AATSLTAAFN NGNGVWDNNK GADYTLPAGV TTVADNTVTA 

       250        260        270        280        290        300 
DADDPCAEEV PDTAAPTVPA GVSARADGVS VVLTWEPSTD DTGVAKYQVT RSGGTGGEVV 

       310        320        330        340        350        360 
SDVGSTVFSD TGLEERTTYT YTVRATDAAG NVSAASAAAI ATTGRRPPAP AAGRPLATDP 

       370        380        390        400        410        420 
RKDPIYFVLT ARFNDGDATN NRGGSQHEKS GNAANDDPMF RGDFKGLVNK LDYIKGLGFS 

       430        440        450        460        470        480 
AVWITPVVLN RSDYDYHGYH GYDFYKVDPR LESAGASYQD LIDAAHAKGM KIYQDVVYNH 

       490        500        510        520        530        540 
SSRWGARGLF TPTVYGVRDS QWSWYYDEKQ PGFEYDGLTV EPKSGKSYYN GDLWSTAEPT 

       550        560        570        580        590        600 
GNTCVNWGRP TGAKSPEGYT LYDCQWPSPT SGMFPKALYH NCWIGNWEGE DSRSCWLHED 

       610        620        630        640        650        660 
LADFNTENPQ VQNYLIGAYD KYIDMGVDGF RVDTAVHIPR TTWNRRFLPA IQERVAQQHG 

       670        680        690        700        710        720 
AEAAKNFFVF GEVAAFVNDK WNRGSVTHSA QFYTWKERKE YSADDAKAAL EMYEYEQQQG 

       730        740        750        760        770        780 
TGNQPTSANA FLEGNSYHVP DHSRFSGMNV IDMRMHMNFG DASNAFHNGK DSDDSYNDAT 

       790        800        810        820        830        840 
YNVVYVDSHD YGPNKSSERF SGGTDAWAEN MSLMWTFRGI PTLYYGSEIE FQKGRKIDCG 

       850        860        870        880        890        900 
PTCPLATTGR AYYGDHLAGD VTASDFSRVD SATGAVATTL AQPLVKHVQR LNQIRRAVPA 

       910        920        930        940        950        960 
LQMGQYSTDG VTGDMAFKRR YTDGGTDSFA LVTVSGGAAY DGIPNGTYRD AVTGDTRTVT 

       970        980        990 
DGRLTVAAPG KGNLRVYVLN GPGKIGADGP YLK

« Hide

References

[1]"amlC, another amylolytic gene maps close to the amlB locus in Streptomyces lividans TK24."
Yin X.H., Gerbaud C., Francou F.X., Guerineau M., Virolle M.J.
Gene 215:171-180(1998) [PubMed: 9666116] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		Z86113 Genomic DNA. Translation: CAB06816.1.

3D structure databases

HSSPHSSP built from PDB template 1K85 based on UniProtKB P20533.
ProteinModelPortalP96992.
ModBaseSearch...

Protein family/group databases

CAZyCBM25. Carbohydrate-Binding Module Family 25.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR005085. CBM_fam25.
IPR003961. Fibronectin_type3.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 4 hits.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 2 hits.
PF00041. fn3. 1 hit.
[Graphical view]
SMARTSM01066. CBM_25. 2 hits.
SM00060. FN3. 1 hit.
[Graphical view]
SUPFAMSSF49265. FN_III-like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS50853. FN3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP96992_STRLI
AccessionPrimary (citable) accession number: P96992
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: June 1, 1998
Last modified: January 25, 2012
This is version 60 of the entry and version 3 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info