Glycosyl transferase - Neisseria meningitidis

Preferred order of sections

Names and origin

Protein names

Submitted name:
Glycosyl transferase EMBL AAB48385.1

Gene names

Name:

lgtC EMBL AAB48385.1

Organism

Neisseria meningitidis EMBL AAB48385.1

Taxonomic identifier

487 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Neisseria

Protein attributes

Sequence length	311 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Manganese PDB 1GA8 PDB 1G9R Metal-binding PDB 1GA8 PDB 1G9R
Molecular function	Transferase EMBL AAB48385.1
Technical term	3D-structure PDB 1GA8 PDB 1G9R
Gene Ontology (GO)
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

103

1

Manganese PDB 1GA8 PDB 1G9R

Metal binding

105

1

Manganese PDB 1GA8 PDB 1G9R

Metal binding

244

1

Manganese; via tele nitrogen PDB 1GA8 PDB 1G9R

Site

130

1

Important for catalytic activity PDB 1GA8

Site

153

1

Important for catalytic activity PDB 1GA8

Site

189

1

Important for catalytic activity PDB 1GA8

Sequences

Sequence

Length

Mass (Da)

Tools

P96945 [UniParc].

Last modified May 1, 1997. Version 1.
Checksum: A33D91283857750B
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FASTA

311

35,744

        10         20         30         40         50         60 
MDIVFAADDN YAAYLCVAAK SVEAAHPDTE IRFHVLDAGI SEANRAAVAA NLRGGGGNIR 

        70         80         90        100        110        120 
FIDVNPEDFA GFPLNIRHIS ITTYARLKLG EYIADCDKVL YLDIDVLVRD SLTPLWDTDL 

       130        140        150        160        170        180 
GDNWLGACID LFVERQEGYK QKIGMADGEY YFNAGVLLIN LKKWRRHDIF KMSCEWVEQY 

       190        200        210        220        230        240 
KDVMQYQDQD ILNGLFKGGV CYANSRFNFM PTNYAFMANW FASRHTDPLY RDRTNTVMPV 

       250        260        270        280        290        300 
AVSHYCGSAK PWHRDCTAWG AERFTELGGS LTTVPEEWRG KLAVPHRMFS TKRMLQRWRR 

       310 
KLSARFLRKI Y

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References

[1]	"The genetic basis of the phase variation repertoire of lipopolysaccharide immunotypes in Neisseria meningitidis." Jennings M.P., Srikhanta Y.N., Moxon E.R., Kramer M., Poolman J.T., Kuipers B., van der Ley P. Microbiology 145:3013-3021(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 126E EMBL AAB48385.1.
[2]	"Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogs." Persson K., Ly H.D., Dieckelmann M., Wakarchuk W.W., Withers S.G., Strynadka N.C. Nat. Struct. Biol. 8:166-175(2001) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) IN COMPLEX WITH MANGANESE, ACTIVE SITE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

U65788 Genomic DNA. Translation: AAB48385.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1G9R	X-ray	2.00	A	1-311	[»]
1GA8	X-ray	2.00	A	1-311	[»]

ProteinModelPortal

P96945.

SMR

P96945. Positions 1-282.

ModBase

Search...

Protein family/group databases

CAZy

GT8. Glycosyltransferase Family 8.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR002495. Glyco_trans_8.
[Graphical view]

Pfam

PF01501. Glyco_transf_8. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

EvolutionaryTrace

P96945.

Entry information

Entry name

P96945_NEIME

Accession

Primary (citable) accession number: P96945

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	April 3, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)