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Protein

Probable endopeptidase YddH

Gene

yddH

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei237NucleophileBy similarity1
Active sitei290Proton acceptorBy similarity1

GO - Molecular functioni

  • cysteine-type peptidase activity Source: UniProtKB-KW
  • endopeptidase activity Source: CACAO
  • lysozyme activity Source: CACAO

Keywordsi

Molecular functionHydrolase, Protease, Thiol protease

Enzyme and pathway databases

BioCyciBSUB:BSU04970-MONOMER

Protein family/group databases

CAZyiGH23 Glycoside Hydrolase Family 23
MEROPSiC40.007

Names & Taxonomyi

Protein namesi
Recommended name:
Probable endopeptidase YddH (EC:3.4.-.-)
Gene namesi
Name:yddH
Ordered Locus Names:BSU04970
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_000001976430 – 329Probable endopeptidase YddHAdd BLAST300

Proteomic databases

PaxDbiP96645
PRIDEiP96645

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100002808

Structurei

3D structure databases

ProteinModelPortaliP96645
SMRiP96645
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase C40 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105K4H Bacteria
COG0741 LUCA
COG0791 LUCA
HOGENOMiHOG000267549
OMAiEAVANNW
PhylomeDBiP96645

Family and domain databases

InterProiView protein in InterPro
IPR023346 Lysozyme-like_dom_sf
IPR000064 NLP_P60_dom
PfamiView protein in Pfam
PF00877 NLPC_P60, 1 hit
SUPFAMiSSF53955 SSF53955, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P96645-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MISKKVVLPL VFSAPFIFFF VLCIVVVMTI SRENQVGDDF IGGGDGEYET
60 70 80 90 100
VGIAPEVERF RAVFEKYARQ EGVFDQVNII MALTMQESGG RSLDIMQSSE
110 120 130 140 150
SIGLPPNSIT DPERSIEVGI KHFKKVFKQA GGDVRLTLQA YNFGSGFIDY
160 170 180 190 200
VKKNGGKYTK KLALDFSRLQ AFKMGWKSYG DPSYVDHVMR YVKGSDKNVK
210 220 230 240 250
PVKGSMDFYE TVMKEALKYE GQPYAWGGSN PETGFDCSGL VQWSFAKAGI
260 270 280 290 300
TLPRTAQEQH GATKKISEKE ATAGDLVFFG GTYEGKAITH VGIYVGNGRM
310 320
FNSNDSGIQY SDLKSGYWRD HLVSFGRIK
Length:329
Mass (Da):36,546
Last modified:May 1, 1997 - v1
Checksum:iB1ADD487E5F5C38E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB001488 Genomic DNA Translation: BAA19334.1
AL009126 Genomic DNA Translation: CAB12304.1
PIRiA69776
RefSeqiNP_388378.1, NC_000964.3
WP_009966633.1, NZ_JNCM01000031.1

Genome annotation databases

EnsemblBacteriaiCAB12304; CAB12304; BSU04970
GeneIDi938136
KEGGibsu:BSU04970
PATRICifig|224308.179.peg.528

Similar proteinsi

Entry informationi

Entry nameiYDDH_BACSU
AccessioniPrimary (citable) accession number: P96645
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2003
Last sequence update: May 1, 1997
Last modified: May 23, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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