Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

C4-dicarboxylate transport protein

Gene

dctA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Responsible for the transport of succinate and fumarate, but not malate, across the membrane.1 Publication

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Symport, Transport

Enzyme and pathway databases

BioCyciBSUB:BSU04470-MONOMER.

Protein family/group databases

TCDBi2.A.23.1.6. the dicarboxylate/amino acid:cation (na(+) or h(+)) symporter (daacs) family.

Names & Taxonomyi

Protein namesi
Recommended name:
C4-dicarboxylate transport protein
Alternative name(s):
C4-dicarboxylate permease
Gene namesi
Name:dctA
Synonyms:dctP, ydbH
Ordered Locus Names:BSU04470
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei9 – 2921HelicalSequence analysisAdd
BLAST
Transmembranei39 – 5921HelicalSequence analysisAdd
BLAST
Transmembranei76 – 9621HelicalSequence analysisAdd
BLAST
Transmembranei145 – 16521HelicalSequence analysisAdd
BLAST
Transmembranei185 – 20521HelicalSequence analysisAdd
BLAST
Transmembranei219 – 23921HelicalSequence analysisAdd
BLAST
Transmembranei316 – 33621HelicalSequence analysisAdd
BLAST
Transmembranei348 – 36821HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 421421C4-dicarboxylate transport proteinPRO_0000202090Add
BLAST

Proteomic databases

PaxDbiP96603.

Expressioni

Inductioni

Induced by succinate and fumarate. Expression of dctA requires the DctB, DctS and DctR proteins and is decreased in the presence of malate.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100002528.

Structurei

3D structure databases

ProteinModelPortaliP96603.
SMRiP96603. Positions 2-399.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107QJT. Bacteria.
COG1301. LUCA.
HOGENOMiHOG000208775.
InParanoidiP96603.
KOiK11103.
OMAiIKMERLG.
OrthoDBiEOG69GZN1.
PhylomeDBiP96603.

Family and domain databases

Gene3Di1.10.3860.10. 1 hit.
HAMAPiMF_01300. C4_dicarb_transport.
InterProiIPR023954. C4_dicarb_transport.
IPR001991. Na-dicarboxylate_symporter.
IPR018107. Na-dicarboxylate_symporter_CS.
[Graphical view]
PANTHERiPTHR11958. PTHR11958. 1 hit.
PfamiPF00375. SDF. 1 hit.
[Graphical view]
PRINTSiPR00173. EDTRNSPORT.
SUPFAMiSSF118215. SSF118215. 1 hit.
PROSITEiPS00713. NA_DICARBOXYL_SYMP_1. 1 hit.
PS00714. NA_DICARBOXYL_SYMP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P96603-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLFKNLTVQ VITAVIIGVI VGLVWPDVGK EMKPLGDTFI NAVKMVIAPI
60 70 80 90 100
IFFTIVLGIA KMGDMKKVGK VGGKAFIYFE VVTTLALIIG LFVVNIMKPG
110 120 130 140 150
AGLDYSKLEK GDVSQYTQNG GQGIDWIEFI THIVPSNMVD AFAKGDILQV
160 170 180 190 200
LFFSILFGVG LAALGEKGKS VIDFFDKVSH VFFKIIGYIM RAAPIGAFGA
210 220 230 240 250
MAYTIGHFGL DSIKPLASLM MSVYITMFLF VFVALNIICK LYGFSLWNYL
260 270 280 290 300
RFIKDELLIV LGTSSSESVL PRMMDKMERY GCSKSVVGLV IPTGYSFNLD
310 320 330 340 350
GTSIYLSMAT VFLAQVFGVD LSIGQQITII LVLMLTSKGA AGVTGSGFIV
360 370 380 390 400
LASTLSALQV IPLEGLALLL GVDRFMSEGR AIVNLIGNGI ATIIVAKSEN
410 420
EFDEAKSIEA VEGMKKMKTA V
Length:421
Mass (Da):45,441
Last modified:May 1, 1997 - v1
Checksum:i29FA5A6BD5DD7A5A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB001488 Genomic DNA. Translation: BAA19284.1.
AL009126 Genomic DNA. Translation: CAB12254.1.
PIRiC69771.
RefSeqiNP_388328.1. NC_000964.3.
WP_003246626.1. NZ_JNCM01000031.1.

Genome annotation databases

EnsemblBacteriaiCAB12254; CAB12254; BSU04470.
GeneIDi938223.
KEGGibsu:BSU04470.
PATRICi18972474. VBIBacSub10457_0465.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB001488 Genomic DNA. Translation: BAA19284.1.
AL009126 Genomic DNA. Translation: CAB12254.1.
PIRiC69771.
RefSeqiNP_388328.1. NC_000964.3.
WP_003246626.1. NZ_JNCM01000031.1.

3D structure databases

ProteinModelPortaliP96603.
SMRiP96603. Positions 2-399.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100002528.

Protein family/group databases

TCDBi2.A.23.1.6. the dicarboxylate/amino acid:cation (na(+) or h(+)) symporter (daacs) family.

Proteomic databases

PaxDbiP96603.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB12254; CAB12254; BSU04470.
GeneIDi938223.
KEGGibsu:BSU04470.
PATRICi18972474. VBIBacSub10457_0465.

Phylogenomic databases

eggNOGiENOG4107QJT. Bacteria.
COG1301. LUCA.
HOGENOMiHOG000208775.
InParanoidiP96603.
KOiK11103.
OMAiIKMERLG.
OrthoDBiEOG69GZN1.
PhylomeDBiP96603.

Enzyme and pathway databases

BioCyciBSUB:BSU04470-MONOMER.

Family and domain databases

Gene3Di1.10.3860.10. 1 hit.
HAMAPiMF_01300. C4_dicarb_transport.
InterProiIPR023954. C4_dicarb_transport.
IPR001991. Na-dicarboxylate_symporter.
IPR018107. Na-dicarboxylate_symporter_CS.
[Graphical view]
PANTHERiPTHR11958. PTHR11958. 1 hit.
PfamiPF00375. SDF. 1 hit.
[Graphical view]
PRINTSiPR00173. EDTRNSPORT.
SUPFAMiSSF118215. SSF118215. 1 hit.
PROSITEiPS00713. NA_DICARBOXYL_SYMP_1. 1 hit.
PS00714. NA_DICARBOXYL_SYMP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A 148 kbp sequence of the region between 35 and 47 degree of the Bacillus subtilis genome."
    Kasahara Y., Nakai S., Lee S., Sadaie Y., Ogasawara N.
    Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  3. "Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis."
    Asai K., Baik S.-H., Kasahara Y., Moriya S., Ogasawara N.
    Microbiology 146:263-271(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, GENE NAME.
    Strain: 168.

Entry informationi

Entry nameiDCTA_BACSU
AccessioniPrimary (citable) accession number: P96603
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 5, 2002
Last sequence update: May 1, 1997
Last modified: May 11, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.