Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Fnr-like regulatory protein

Gene
N/A
Organism
Acidithiobacillus ferridurans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Fnr-like regulatory proteinImported
Encoded oniPlasmid pTF5Imported
OrganismiAcidithiobacillus ferriduransImported
Taxonomic identifieri1232575 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAcidithiobacilliaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus

Structurei

3D structure databases

ProteinModelPortaliP96094.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini19 – 8769Cyclic nucleotide-bindingInterPro annotationAdd
BLAST
Domaini154 – 22370HTH crp-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH crp-type DNA-binding domain.SAAS annotation

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00027. cNMP_binding. 1 hit.
PF13545. HTH_Crp_2. 1 hit.
[Graphical view]
PRINTSiPR00034. HTHCRP.
SMARTiSM00100. cNMP. 1 hit.
SM00419. HTH_CRP. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiPS50042. CNMP_BINDING_3. 1 hit.
PS51063. HTH_CRP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P96094-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIGQVELTE MERLRRTEIF SVWSDEDLSH LFKGARVLEM SVGQILFLEG
60 70 80 90 100
DAATAFYFLL DGQVKLVTSA ADGHEKIVDI LQGGDLFCRS CSFFGISLSR
110 120 130 140 150
AGNSGHARPG SGNSPYDNFL VTLQQHQELM LQMLGELSLR LRHLIMELRH
160 170 180 190 200
LTVESADQRV AGYLLELCPS GNSPVSLLLP AKKAMIAARL GLTPETFSRV
210 220 230
LKRLREEHLI AVEKLKIYIH RPSELRQWAN SKSSTR
Length:236
Mass (Da):26,451
Last modified:May 1, 1997 - v1
Checksum:i2F71CC14F224FC16
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73041 Genomic DNA. Translation: AAC80174.1.
RefSeqiNP_863590.1. NC_005023.1.
WP_011117665.1. NC_005023.1.

Genome annotation databases

GeneIDi3722461.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73041 Genomic DNA. Translation: AAC80174.1.
RefSeqiNP_863590.1. NC_005023.1.
WP_011117665.1. NC_005023.1.

3D structure databases

ProteinModelPortaliP96094.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3722461.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00027. cNMP_binding. 1 hit.
PF13545. HTH_Crp_2. 1 hit.
[Graphical view]
PRINTSiPR00034. HTHCRP.
SMARTiSM00100. cNMP. 1 hit.
SM00419. HTH_CRP. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiPS50042. CNMP_BINDING_3. 1 hit.
PS51063. HTH_CRP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "A geographically widespread plasmid from Thiobacillus ferrooxidans has genes for ferredoxin-, FNR-, prismane- and NADH-oxidoreductase-like proteins which are also located on the chromosome."
    Dominy C.N., Deane S.M., Rawlings D.E.
    Microbiology 143:3123-3136(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 33020Imported.
    Plasmid: pTF5

Entry informationi

Entry nameiP96094_9PROT
AccessioniPrimary (citable) accession number: P96094
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: July 6, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.