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Protein

50S ribosomal protein L13

Gene

rpl13

Organism
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rpl13UniRule annotation
Synonyms:rpl13AbUniRule annotation
Ordered Locus Names:SSO0069
ORF Names:C05002, C05_041
OrganismiSulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Taxonomic identifieri273057 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001974 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001337651 – 14950S ribosomal protein L13Add BLAST149

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi273057.SSO0069.

Structurei

3D structure databases

ProteinModelPortaliP95991.
SMRiP95991.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04242. Archaea.
COG0102. LUCA.
HOGENOMiHOG000225287.
InParanoidiP95991.
KOiK02871.
OMAiRYHNFLH.
OrthoDBiPOG093Z0DQ4.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR005755. Ribosomal_L13_euk/arc.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF8. PTHR11545:SF8. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

P95991-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTQVQEQVV IINAEGQILG RMASNVVRLL KEGKKVIIVN GEKAVISGEK
60 70 80 90 100
NRVIESYKLL LTVKTLFNPY RNGIRRPRSP INIVKRTIRG MLPKSSKGRR
110 120 130 140
MLKNVKIYVG VPKEFEGRQF IKFPDSDVSR LKGKYVTVEV VSKELGWSG
Length:149
Mass (Da):16,855
Last modified:May 1, 1997 - v1
Checksum:i8663E73439FA943B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08257 Genomic DNA. Translation: CAA69533.1.
AE006641 Genomic DNA. Translation: AAK40431.1.
PIRiS75419.
RefSeqiWP_009988879.1. NC_002754.1.

Genome annotation databases

EnsemblBacteriaiAAK40431; AAK40431; SSO0069.
GeneIDi27426365.
KEGGisso:SSO0069.
PATRICifig|273057.12.peg.70.

Similar proteinsi

Entry informationi

Entry nameiRL13_SULSO
AccessioniPrimary (citable) accession number: P95991
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: May 1, 1997
Last modified: June 7, 2017
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families