P95868 (P95868_SULSF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycogen operon protein GlgX EMBL CAA69504.1

Gene names

Name:

orf c06021 EMBL CAA69504.1

Organism

Sulfolobus solfataricus EMBL CAA69504.1

Taxonomic identifier

2287 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus

Protein attributes

Sequence length	718 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 2VR5 PDB 2VUY PDB 2VNC
Gene Ontology (GO)
Biological process	glycogen catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glycogen debranching enzyme activity Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	401	1	Glucose PDB 2VR5
	Binding site	408	1	Glucose PDB 2VR5

Sequences

	Sequence		Length	Mass (Da)
	P95868 [UniParc]. Last modified May 1, 1997. Version 1. Checksum: 43E7538DE8131788	FASTA	718	83,091
	10 20 30 40 50 60 MALFFRTRDR PLRPGDPYPL GSNWIEDDDG VNFSLFSENA EKVELLLYSL TNQKYPKEII 70 80 90 100 110 120 EVKNKTGDIW HVFVPGLRPG QLYAYRVYGP YKPELGLRFN PNKVLIDPYA KAINGSVIWN 130 140 150 160 170 180 DAVFGYKIGD QNQDLTYDER DSGEYVPKSV VINPYFEWDD EDFIKGKKVP LKDTVIYEVH 190 200 210 220 230 240 VKGFTKLRLD LPENIRGTYE GLASEQMISY LKDLGITTVE LMPVFHFIDQ RFLTDKGLTN 250 260 270 280 290 300 YWGYDPINFF SPECRYSSTG CLGGQVLSFK KMVNELHNAG IEVIIDVVYN HTAEGNHLGP 310 320 330 340 350 360 TLSFRGIDNT AYYMLQPDNK RYYLDFTGTG NTLNLSHPRV IQMVLDSLRY WVTEMHVDGF 370 380 390 400 410 420 RFDLAAALAR ELYSVNMLNT FFIALQQDPI LSQVKLIAEP WDVGQGGYQV GNFPYQWAEW 430 440 450 460 470 480 NGKYRDSIRR FWRGEALPYS EIANRLLGSP DIYLGNNKTP FASINYVTSH DGFTLEDLVS 490 500 510 520 530 540 YNQKHNEANG FNNQDGMNEN YSWNCGAEGP TNDQNVVICR EKQKRNFMIT LLVSQGTPMI 550 560 570 580 590 600 LGGDELSRTQ RGNNNAFCQD NEITWFDWNL DERKSKFLEF VKKMIQFYRA HPAFRRERYF 610 620 630 640 650 660 QGKKLFGMPL KDVTFYTLEG REVDEKTWSS PTQLVIFVLE GSVMDEINMY GERIADDSFL 670 680 690 700 710 IILNANPNNV KVKFPKGKWE LVISSYLREI KPEERIIEGE KELEIEGRTA LVYRRIEL

References

[1]	"Organizational characteristics and information content of an archaeal genome: 156 kb of sequence from Sulfolobus solfataricus P2." Sensen C.W., Klenk H.-P., Singh R.K., Allard G., Chan C.C.-Y., Liu Q.Y., Penny S.L., Young F., Schenk M.E., Gaasterland T., Doolittle W.F., Ragan M.A., Charlebois R.L. Mol. Microbiol. 22:175-191(1996) [PubMed: 8899719] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: P2 EMBL CAA69504.1.
[2]	"Structural Insight Into the Bifunctional Mechanism of the Glycogen Debranching Enzyme Trex from the Archaeon Sulfolobus Solfataricus." Woo E.-J., Cha H.-J., Yoon S.-M., Lee S.-J., Park K.-H., Song H.-N. Submitted (MAR-2008) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS) IN COMPLEX WITH GLUCOSE.
[3]	"Structural Insight Into the Bifunctional Mechanism of the Glycogen Debranching Enzyme Trex from the Archaeon Sulfolobus Solfataricus." Woo E.-J., Cha H.-J., Yoon S.-M., Lee S.-J., Park K.-H., Song H.-N. Submitted (JUN-2008) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS).
[4]	"Structural insight into the bifunctional mechanism of the glycogen-debranching enzyme TreX from the archaeon Sulfolobus solfataricus." Woo E.J., Lee S., Cha H., Park J.T., Yoon S.M., Song H.N., Park K.H. J. Biol. Chem. 283:28641-28648(2008) [PubMed: 18703518] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS).
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Y08256 Genomic DNA. Translation: CAA69504.1.

PIR

S73088.

RefSeq

NP_343483.1. NC_002754.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2VNC	X-ray	3.00	A/B	1-718	[»]
2VR5	X-ray	2.80	A/B	1-718	[»]
2VUY	X-ray	3.00	A/B	1-718	[»]

ProteinModelPortal

P95868.

ModBase

Search...

Protein family/group databases

CAZy

CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1453600.

NMPDR

fig|273057.1.peg.1906.

Phylogenomic databases

HOGENOM

HBG350946.

OMA

AIREQQK.

PhylomeDB

P95868.

ProtClustDB

CLSK268318.

Enzyme and pathway databases

BioCyc

SSOL273057:SSO2094-MONOMER.

Family and domain databases

InterPro

IPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR011837. Glycogen_debranch_debranch.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]

Gene3D

G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.

PANTHER

PTHR10357. Alpha_amylase. 1 hit.
PTHR10357:SF74. PTHR10357:SF74. 1 hit.

Pfam

PF00128. Alpha-amylase. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]

SUPFAM

SSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.

TIGRFAMs

TIGR02100. GlgX_debranch. 1 hit.

ProtoNet

Search...

Entry information

Entry name

P95868_SULSF

Accession

Primary (citable) accession number: P95868

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	October 19, 2011
This is version 75 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)