Endo-a1,5-arabinanase - Cellvibrio japonicus

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Unreviewed, UniProtKB/TrEMBL P95470 (P95470_9GAMM)

Last modified April 14, 2009. Version 31. History...

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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Endo-a1,5-arabinanase EMBL CAA71485.1
EC=3.2.1.99

Gene names

Name:

arbA EMBL CAA71485.1

Organism

Cellvibrio japonicus EMBL CAA71485.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Molecular function	Glycosidase Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	arabinan endo-1,5-alpha-L-arabinosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

P95470-1 [UniParc].

Last modified May 1, 1997. Version 1.
Checksum: C0171992B6F8C314
Show »

347

39,432

        10         20         30         40         50         60 
MPTHHPITRQ HWHHSWLSAL ALLCASLACG AKQVDVHDPV MTREGDTWYL FSTGPGITIY 

        70         80         90        100        110        120 
SSKDRVNWRY SDRAFGTEPT WAKRVSPSFD GHLWAPDIYQ HKGLFYLYYS VSAFGKNTSA 

       130        140        150        160        170        180 
IGVTVNKTLN PASPDYRWED KGIVIESVPQ RDLWNAIDPA IIADDHGQVW MSFGSFWGGL 

       190        200        210        220        230        240 
KLFKLNDDLT RPAEPQEWHS IAKLERSVLM DDSQAGSAQI EAPFILRKGD YYYLFASWGL 

       250        260        270        280        290        300 
CCRKGDSTYH LVVGRSKQVT GPYLDKTGRD MNQGGGSLLI KGNKRWVGLG HNSAYTWDGK 

       310        320        330        340 
DYLVLHAYEA ADNYLQKLKI LNLHWDGEGW PQVDEKELDS YISQRLK

References

[1]	"Arabinanase A from Pseudomonas fluorescens subsp. cellulosa exhibits both an endo- and an exo- mode of action." McKie V.A., Black G.W., Millward-Sadler S.J., Hazlewood G.P., Laurie J.I., Gilbert H.J. Biochem. J. 323:547-555(1997) [PubMed: 9163351] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold." Nurizzo D., Turkenburg J.P., Charnock S.J., Roberts S.M., Dodson E.J., McKie V.A., Taylor E.J., Gilbert H.J., Davies G.J. Nat. Struct. Biol. 9:665-668(2002) [PubMed: 12198486] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.89 ANGSTROMS) OF 30-347.

Cross-references

Sequence databases

Y10458 Genomic DNA. Translation: CAA71485.1.

3D structure databases

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1GYD	X-ray	2.05	B	33-347	[»]
1GYE	X-ray	2.50	B	32-346	[»]
1GYH	X-ray	1.89	A/B/C/D/E/F	30-347	[»]

ModBase

Protein family/group databases

CAZy

GH43. Glycoside Hydrolase Family 43.

Family and domain databases

InterPro

IPR006710. Glyco_hydro_43.
IPR016840. Glyco_hydro_43_endo_a_Ara-ase.
[Graphical view]

PANTHER

PTHR22925. Glyco_hydro_43. 1 hit.

Pfam

PF04616. Glyco_hydro_43. 1 hit.
[Graphical view]

PIRSF

PIRSF026534. Endo_alpha-L-arabinosidase. 1 hit.

ProtoNet

Entry information

Entry name

P95470_9GAMM

Accession

Primary (citable) accession number: P95470

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	April 14, 2009
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information