P95470 (P95470_9GAMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-a1,5-arabinanase EMBL CAA71485.1
EC=3.2.1.99 EMBL CAA71485.1

Gene names

Name:

arbA EMBL CAA71485.1

Organism

Cellvibrio japonicus EMBL CAA71485.1

Taxonomic identifier

155077 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAA71485.1 Hydrolase
Technical term	3D-structure PDB 1GYE PDB 1GYD PDB 1GYH
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	arabinan endo-1,5-alpha-L-arabinosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P95470 [UniParc]. Last modified May 1, 1997. Version 1. Checksum: C0171992B6F8C314	FASTA	347	39,432
	10 20 30 40 50 60 MPTHHPITRQ HWHHSWLSAL ALLCASLACG AKQVDVHDPV MTREGDTWYL FSTGPGITIY 70 80 90 100 110 120 SSKDRVNWRY SDRAFGTEPT WAKRVSPSFD GHLWAPDIYQ HKGLFYLYYS VSAFGKNTSA 130 140 150 160 170 180 IGVTVNKTLN PASPDYRWED KGIVIESVPQ RDLWNAIDPA IIADDHGQVW MSFGSFWGGL 190 200 210 220 230 240 KLFKLNDDLT RPAEPQEWHS IAKLERSVLM DDSQAGSAQI EAPFILRKGD YYYLFASWGL 250 260 270 280 290 300 CCRKGDSTYH LVVGRSKQVT GPYLDKTGRD MNQGGGSLLI KGNKRWVGLG HNSAYTWDGK 310 320 330 340 DYLVLHAYEA ADNYLQKLKI LNLHWDGEGW PQVDEKELDS YISQRLK

References

[1]	"Arabinanase A from Pseudomonas fluorescens subsp. cellulosa exhibits both an endo- and an exo- mode of action." McKie V.A., Black G.W., Millward-Sadler S.J., Hazlewood G.P., Laurie J.I., Gilbert H.J. Biochem. J. 323:547-555(1997) [PubMed: 9163351] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold." Nurizzo D., Turkenburg J.P., Charnock S.J., Roberts S.M., Dodson E.J., McKie V.A., Taylor E.J., Gilbert H.J., Davies G.J. Nat. Struct. Biol. 9:665-668(2002) [PubMed: 12198486] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.89 ANGSTROMS) OF 30-347.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Y10458 Genomic DNA. Translation: CAA71485.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1GYD	X-ray	2.05	B	33-347	[»]
1GYE	X-ray	2.50	B	32-346	[»]
1GYH	X-ray	1.89	A/B/C/D/E/F	30-347	[»]

ProteinModelPortal

P95470.

SMR

P95470. Positions 33-347.

ModBase

Search...

Protein family/group databases

CAZy

GH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
IPR016840. Glyco_hydro_43_endo_a_Ara-ase.
[Graphical view]

Gene3D

G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.

PANTHER

PTHR22925. Glyco_hydro_43. 1 hit.

Pfam

PF04616. Glyco_hydro_43. 1 hit.
[Graphical view]

PIRSF

PIRSF026534. Endo_alpha-L-arabinosidase. 1 hit.

SUPFAM

SSF75005. Glyco_hydro_43_beta-prop. 1 hit.

ProtoNet

Search...

Entry information

Entry name

P95470_9GAMM

Accession

Primary (citable) accession number: P95470

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	March 8, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)