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Protein

HTH-type transcriptional regulator BsdA

Gene

bsdA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Could be a positive regulator of bsdBCD expression in response to salicylic acid.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU03620-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator BsdA
Alternative name(s):
Bsd operon regulatory protein
Gene namesi
Name:bsdA
Synonyms:yclA
Ordered Locus Names:BSU03620
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003599561 – 290HTH-type transcriptional regulator BsdAAdd BLAST290

Proteomic databases

PaxDbiP94403
PRIDEiP94403

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100002053

Structurei

3D structure databases

ProteinModelPortaliP94403
SMRiP94403
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 59HTH lysR-typePROSITE-ProRule annotationAdd BLAST59

Phylogenomic databases

eggNOGiENOG4106P55 Bacteria
ENOG410YGJ0 LUCA
HOGENOMiHOG000233514
InParanoidiP94403
KOiK21755
OMAiCECHDSA
PhylomeDBiP94403

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

P94403-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIRQLRYFI TIAQEQKITS AAKKLHMAQP PLSRQLKQLE DELGVVLFDR
60 70 80 90 100
NKKKQMTLTY EGAVFLKRAK EILHRFEDAV IEVQELKEEV AGTLAVGSTI
110 120 130 140 150
YCAALMLEKV TQIKERYPHL TFNIWENEPA TLLELLESRQ IDAAVTTTLI
160 170 180 190 200
KSDTVQFKQL DDIPCVLVLS DEAGYPCGDT IKMVDIPSFP LILLRPVNGK
210 220 230 240 250
GVYNQVMNEF HRLNLEPRIV CECHDSATLL SLVSSGFGAS ILPVTMIPVH
260 270 280 290
MRNHVHTVHI ENNPFIMTPA VMWRTDSYLP KPAQQFLDLF
Length:290
Mass (Da):32,987
Last modified:May 1, 1997 - v1
Checksum:i81E691A2E2D2C88C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D50453 Genomic DNA Translation: BAA08995.1
AL009126 Genomic DNA Translation: CAB12156.1
PIRiF69761
RefSeqiNP_388244.1, NC_000964.3
WP_003246552.1, NZ_JNCM01000031.1

Genome annotation databases

EnsemblBacteriaiCAB12156; CAB12156; BSU03620
GeneIDi938299
KEGGibsu:BSU03620
PATRICifig|224308.179.peg.381

Entry informationi

Entry nameiBSDA_BACSU
AccessioniPrimary (citable) accession number: P94403
Secondary accession number(s): Q797P8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: May 1, 1997
Last modified: May 23, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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