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Protein

Uncharacterized HTH-type transcriptional regulator YcgK

Gene

ycgK

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU03170-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YcgK
Gene namesi
Name:ycgK
Ordered Locus Names:BSU03170
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003599471 – 324Uncharacterized HTH-type transcriptional regulator YcgKAdd BLAST324

Proteomic databases

PaxDbiP94387

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100001773

Structurei

3D structure databases

ProteinModelPortaliP94387
SMRiP94387
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4105C5Q Bacteria
ENOG410XNR2 LUCA
HOGENOMiHOG000233514
InParanoidiP94387
KOiK04761
OMAiGNPCHDV
PhylomeDBiP94387

Family and domain databases

Gene3Di1.10.10.101 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

P94387-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIKVMEYAA EIARRQSFTK AAEHLHIAQP SLSQQIKKLE AELGLTLFHR
60 70 80 90 100
SHGSVTLTPH GRRFIEKAED IIRSRDDLLR EMQERSQGIG HKLSIGIPAV
110 120 130 140 150
TGRYLFPPLL KQFLARYPHV EVQLVEKDPV SLEKMTAKGE VDLSVLSLPI
160 170 180 190 200
EDERLSITPL LTEPVVLAVP KEKQRWMPPE LVALIEKALE EDEGRQPCVP
210 220 230 240 250
IDMVRNVPFI LLKEGFGFRR TVLDLCAESG FKPNAAFKTS HIETAQSLVA
260 270 280 290 300
NGLGVTMAPN MVRRDKDPGV IYLSIQSAPS RTLVFVFLKN RYVSLTAQAF
310 320
MELSRESLKQ TFDEGCLGNK DENI
Length:324
Mass (Da):36,450
Last modified:June 16, 2009 - v2
Checksum:i8ADDB22FA86609D8
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti23E → V in BAA08951 (PubMed:8969502).Curated1
Sequence conflicti114L → V in BAA08951 (PubMed:8969502).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D50453 Genomic DNA Translation: BAA08951.1
AL009126 Genomic DNA Translation: CAB12111.2
PIRiF69758
RefSeqiNP_388199.2, NC_000964.3
WP_003246430.1, NZ_JNCM01000030.1

Genome annotation databases

EnsemblBacteriaiCAB12111; CAB12111; BSU03170
GeneIDi938340
KEGGibsu:BSU03170
PATRICifig|224308.179.peg.331

Similar proteinsi

Entry informationi

Entry nameiYCGK_BACSU
AccessioniPrimary (citable) accession number: P94387
Secondary accession number(s): Q797Q8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: June 16, 2009
Last modified: March 28, 2018
This is version 107 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome