Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

ATP-binding/permease protein CydC

Gene

cydC

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Somehow involved in the cytochrome D branch of aerobic respiration. Seems to be a component of a transport system (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi360 – 367ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciBSUB:BSU38740-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
ATP-binding/permease protein CydC
Gene namesi
Name:cydC
Synonyms:yxkM
Ordered Locus Names:BSU38740
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei14 – 34HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei44 – 64HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei130 – 150HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei156 – 176HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei240 – 260HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei266 – 286HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000922401 – 567ATP-binding/permease protein CydCAdd BLAST567

Proteomic databases

PaxDbiP94366.
PRIDEiP94366.

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100020906.

Structurei

3D structure databases

ProteinModelPortaliP94366.
SMRiP94366.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 298ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST284
Domaini321 – 561ABC transporterPROSITE-ProRule annotationAdd BLAST241

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108JJ9. Bacteria.
COG4988. LUCA.
InParanoidiP94366.
KOiK16013.
OMAiFPLNWAA.
PhylomeDBiP94366.

Family and domain databases

Gene3Di1.20.1560.10. 1 hit.
InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR036640. ABC1_TM_sf.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR014216. ABC_transptr_CydD.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
TIGRFAMsiTIGR02857. CydD. 1 hit.
PROSITEiView protein in PROSITE
PS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P94366-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKDLFRYKG MKRILTLITC LTLIQTAAII MQAEWLSEAV TGLFNGKGIT
60 70 80 90 100
SLLPVIGFFL IAFIARHGMT VARQKIVYQY AARTGADLRK SFLDQLFRLG
110 120 130 140 150
PRFAKKEGTG QMVTLAMEGI SQFRRYLELF LPKMVSMAIV PAAVVIYVFF
160 170 180 190 200
QDRTSAIILV AAMPILIIFM ILLGLVAQRK ADRQWKSYQR LSNHFVDSLR
210 220 230 240 250
GLETLRFLGL SKSHSKNIFY VSERYRKATM STLRVAFLSS FALDFFTMLS
260 270 280 290 300
VATVAVFLGL RLIDGDILLG PALTALILAP EYFLPVREVG NDYHATLNGQ
310 320 330 340 350
EAGKTIQEIL SQPGFKEETP LQLEAWSDQD ELKLSGVSVG RSVSDIHLSF
360 370 380 390 400
KGKKKIGIIG ASGAGKSTLI DILGGFLEPD GGMIEVNGTS RSHLQDGSWQ
410 420 430 440 450
KNLLYIPQHP YIFDDTLGNN IRFYHPSASA EDTTRAAASA GLTELVNNLP
460 470 480 490 500
DGLEGRIGEG GRALSGGQAQ RVALARAFLG NRPILLLDEP TAHLDIETEY
510 520 530 540 550
EIKETMLDLF EDKLVFLATH RLHWMLDMDE IIVLDGGRVA EIGTHNELLE
560
KNGVYTKLVK AQLGERA
Length:567
Mass (Da):62,806
Last modified:May 1, 1997 - v1
Checksum:i74F2500E08C6637D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83026 Genomic DNA. Translation: BAA11729.1.
AL009126 Genomic DNA. Translation: CAB15900.1.
PIRiC69611.
RefSeqiNP_391753.1. NC_000964.3.
WP_003244017.1. NZ_JNCM01000034.1.

Genome annotation databases

EnsemblBacteriaiCAB15900; CAB15900; BSU38740.
GeneIDi936498.
KEGGibsu:BSU38740.
PATRICifig|224308.179.peg.4193.

Similar proteinsi

Entry informationi

Entry nameiCYDC_BACSU
AccessioniPrimary (citable) accession number: P94366
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: May 1, 1997
Last modified: October 25, 2017
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. SIMILARITY comments
    Index of protein domains and families