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P94293 (P94293_BURCE) Unreviewed, UniProtKB/TrEMBL

Last modified August 10, 2010. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Polygalacturonase EMBL AAB46984.1
Gene names
Name:pehA EMBL AAB46984.1
Encoded onPlasmid pPEC320 EMBL AAB46984.1
OrganismBurkholderia cepacia (Pseudomonas cepacia) EMBL AAB46984.1
Taxonomic identifier292 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length458 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termPlasmid EMBL AAB46984.1
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionpolygalacturonase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
P94293 [UniParc].

Last modified May 1, 1997. Version 1.
Checksum: 385E372577469FA0

FASTA45846,145
        10         20         30         40         50         60 
MKGKSSTRLV LRLSTLAALA VQASAQAATC TPQWSSSAST NTTNLQNAIQ QCAASGTSSS 

        70         80         90        100        110        120 
PGLVDLASNN GISTAVITSV NLANNIVLKL EKGFTLKGSP AQPSSGAMLT GSNLSNLTIT 

       130        140        150        160        170        180 
GTGAIDGDGQ DYWPAAVGQN NTARPKLIAI TGSNLQIGSN FTDAGKSQSI VAFPSSSNAT 

       190        200        210        220        230        240 
GSALIIRNSP KEQLVIESGS KNVTIDGVWI YANPNRNASG DDLAPNTDAI DIIGTQTATI 

       250        260        270        280        290        300 
KNCLLDTGDD DIAIKSNAGG AATSSVNVSH CVVGGGHGIS IGGQEAAGTT LAKPGVSQVT 

       310        320        330        340        350        360 
VDTMQFSGTD YGYRIKTDQT AKDSGATTGV TYRNTCMRNV QQPFLFTYAY ASGTGGALPI 

       370        380        390        400        410        420 
IANVTIDNVI ATATKQQGAI IGLSNSLMGV PKSGDTGISI TNSQISGGKA FSVTDGELQL 

       430        440        450 
GSHSSATTST GSNGQVVGIP DTGATLSCPS SITIPAQI

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References

[1]"Mobilization, cloning, and sequence determination of a plasmid-encoded polygalacturonase from a phytopathogenic Burkholderia (Pseudomonas) cepacia."
Gonzalez C.F., Pettit E.A., Valadez V.A., Provin E.M.
Mol. Plant Microbe Interact. 10:840-851(1997) [PubMed: 9304858] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 25416 EMBL AAB46984.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U85788 Genomic DNA. Translation: AAB46984.1.

3D structure databases

HSSPHSSP built from PDB template 1BHE based on UniProtKB P26509.
ProteinModelPortalP94293.
ModBaseSearch...

Protein family/group databases

CAZyGH28. Glycoside Hydrolase Family 28.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR000743. Glyco_hydro_28.
IPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF00295. Glyco_hydro_28. 1 hit.
[Graphical view]
SMARTSM00710. PbH1. 4 hits.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameP94293_BURCE
AccessionPrimary (citable) accession number: P94293
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: August 10, 2010
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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