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Protein
Submitted name:

Histone H1

Gene

His1-3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • nucleosomal DNA binding Source: TAIR

GO - Biological processi

  • nucleosome assembly Source: InterPro
  • response to water deprivation Source: TAIR

Keywordsi

Molecular functionDNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Histone H1Imported
Submitted name:
Histone H1-3Imported
Submitted name:
Putative histone H1 proteinImported
Gene namesi
Name:His1-3Imported
Synonyms:HIS1-3Imported, histone H1-3Imported
Ordered Locus Names:At2g18050Imported
ORF Names:T27K22.8Imported, T27K22_8Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G18050.
TAIRilocus:2060984. AT2G18050.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChromosomeUniRule annotationSAAS annotation, NucleusUniRule annotationSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiP94109. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G18050.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 93H15InterPro annotationAdd BLAST71

Sequence similaritiesi

Belongs to the histone H1/H5 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410J1R8. Eukaryota.
ENOG410XWIM. LUCA.
HOGENOMiHOG000241672.
KOiK11275.
OMAiLSDTTKM.
OrthoDBiEOG09360ZN7.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005818. Histone_H1/H5_H15.
IPR005819. Histone_H5.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00538. Linker_histone. 1 hit.
PRINTSiPR00624. HISTONEH5.
SMARTiView protein in SMART
SM00526. H15. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS51504. H15. 1 hit.

Sequencei

Sequence statusi: Complete.

P94109-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEDKILKKT PAAKKPRKPK TTTHPPYFQM IKEALMVLKE KNGSSPYAIA
60 70 80 90 100
KKIEEKHKSL LPESFRKTLS LQLKNSVAKG KLVKIRASYK LSDTTKMITR
110 120 130 140 150
QQDKKNKKNM KQEDKEITKR TRSSSTRPKK TVSVNKQEKK RKVKKARQPK
160
SIKSSVGKKK AMKASAA
Length:167
Mass (Da):19,049
Last modified:May 1, 1997 - v1
Checksum:i33CBF22BBE15D918
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U72241 Genomic DNA. Translation: AAC49789.1.
U73781 mRNA. Translation: AAC49790.1.
AC006201 Genomic DNA. Translation: AAD20121.1.
AY045797 mRNA. Translation: AAK76471.1.
AY079414 mRNA. Translation: AAL85145.1.
AY084603 mRNA. Translation: AAM61167.1.
CP002685 Genomic DNA. Translation: AEC06720.1.
PIRiF84559.
RefSeqiNP_179396.1. NM_127361.3.
UniGeneiAt.24439.

Genome annotation databases

EnsemblPlantsiAT2G18050.1; AT2G18050.1; AT2G18050.
GeneIDi816317.
GrameneiAT2G18050.1; AT2G18050.1; AT2G18050.
KEGGiath:AT2G18050.

Similar proteinsi

Entry informationi

Entry nameiP94109_ARATH
AccessioniPrimary (citable) accession number: P94109
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: September 27, 2017
This is version 149 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported