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Protein

Polcalcin Cyn d 7

Gene
N/A
Organism
Cynodon dactylon (Bermuda grass) (Panicum dactylon)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Calcium bindingi15 – 26121PROSITE-ProRule annotationAdd
BLAST
Calcium bindingi50 – 61122PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Calcium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Polcalcin Cyn d 7
Alternative name(s):
Calcium-binding pollen allergen Cyn d 7
Calcium-binding protein B1
Allergen: Cyn d 7
OrganismiCynodon dactylon (Bermuda grass) (Panicum dactylon)
Taxonomic identifieri28909 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladeChloridoideaeCynodonteaeEleusininaeCynodon

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human. Binds to IgE.

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei280. Cyn d 7.
3238. Cyn d 7.0101.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8080Polcalcin Cyn d 7PRO_0000073672Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP94092.
SMRiP94092. Positions 6-80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 3736EF-hand 1PROSITE-ProRule annotationAdd
BLAST
Domaini37 – 7236EF-hand 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 EF-hand domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Family and domain databases

Gene3Di1.10.238.10. 1 hit.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 1 hit.
[Graphical view]
SMARTiSM00054. EFh. 2 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P94092-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADTGDMEHI FKRFDTNGDG KISLAELTDA LRTLGSTSAD EVQRMMAEID
60 70 80
TDGDGFIDFD EFISFCNANP GLMKDVAKVF
Length:80
Mass (Da):8,801
Last modified:June 20, 2001 - v2
Checksum:iF83347BD7C2676F5
GO

Sequence cautioni

The sequence AAC49648 differs from that shown. Reason: Erroneous initiation. Curated
The sequence CAA62634 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X91256 mRNA. Translation: CAA62634.1. Different initiation.
U35683 Genomic DNA. Translation: AAC49648.1. Different initiation.
U75585 mRNA. Translation: AAD00247.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X91256 mRNA. Translation: CAA62634.1. Different initiation.
U35683 Genomic DNA. Translation: AAC49648.1. Different initiation.
U75585 mRNA. Translation: AAD00247.1.

3D structure databases

ProteinModelPortaliP94092.
SMRiP94092. Positions 6-80.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

Allergomei280. Cyn d 7.
3238. Cyn d 7.0101.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.238.10. 1 hit.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 1 hit.
[Graphical view]
SMARTiSM00054. EFh. 2 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPOLC7_CYNDA
AccessioniPrimary (citable) accession number: P94092
Secondary accession number(s): Q9SAR4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: June 20, 2001
Last modified: February 17, 2016
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. Allergens
    Nomenclature of allergens and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.