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Protein
Submitted name:

Class I chitinase

Gene
N/A
Organism
Medicago sativa (Alfalfa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Chitin-bindingUniRule annotationSAAS annotation

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Submitted name:
Class I chitinaseImported
OrganismiMedicago sativa (Alfalfa)Imported
Taxonomic identifieri3879 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaeTrifolieaeMedicago

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence analysisAdd
BLAST
Chaini24 – 327304Sequence analysisPRO_5007697388Add
BLAST

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini23 – 6442Chitin-binding type-1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 19 family.SAAS annotation
Contains 1 chitin-binding type-1 domain.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.30.60.10. 1 hit.
InterProiIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamiPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P94084-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLMKMRLALV TTVVLLIIGC SFAEQCGKQA GGALCPGGLC CSKFGWCGST
60 70 80 90 100
GEYCGDGCQS QCGGSSGGGG DLGSLISRDT FNNMLKHRDD SGCQGKGLYT
110 120 130 140 150
YDAFISAAKA FPNFANNGDT ATKKREIAAF LGQTSHETTG GWATAPDGPY
160 170 180 190 200
AWGYCFVREQ NPSTYCQPSS EFPCASGKQY YGRGPIQISW NYNYGQCGRA
210 220 230 240 250
IGVDLLNNPD LVATDPVISF KTALWFWMTP QSPKPSCHDV ITGRWSPSSA
260 270 280 290 300
DRAAGRLSGY GTVTNIINGG LECGRGQDGR VQDRIGFYKR YCDILGVGYG
310 320
ANLDCFSQRP FGSSLSLSSL FLNSIDT
Length:327
Mass (Da):34,923
Last modified:May 1, 1997 - v1
Checksum:i1C7B8275C9CBCBD3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U83591 mRNA. Translation: AAB41324.1.
U83592 mRNA. Translation: AAB41325.1.
EU294179 Genomic DNA. Translation: ABX90065.1.
PIRiT09687.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U83591 mRNA. Translation: AAB41324.1.
U83592 mRNA. Translation: AAB41325.1.
EU294179 Genomic DNA. Translation: ABX90065.1.
PIRiT09687.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.60.10. 1 hit.
InterProiIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamiPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Age-dependent and pathogen-induced expression of an alfalfa class I chitinase cDNA."
    Saruul P., Vance C.P., Samac D.A.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: RootImported.
  2. Wang X., Han L., Luo J.
    Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiP94084_MEDSA
AccessioniPrimary (citable) accession number: P94084
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: July 6, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.