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Protein
Submitted name:

Glycinin

Gene

Gly A3B4

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Seed storage protein.UniRule annotation
This protein found in the seeds of many leguminous and non-leguminous plants is the source of sulfur-containing amino acids in seed meals.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Seed storage proteinUniRule annotation, Storage protein

Names & Taxonomyi

Protein namesi
Submitted name:
GlycininImported
Gene namesi
Name:Gly A3B4Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

Pathology & Biotechi

Protein family/group databases

Allergomei5821. Gly m 6.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24UniRule annotationAdd BLAST24
ChainiPRO_500775078625 – 517UniRule annotationAdd BLAST493

Keywords - PTMi

Disulfide bondUniRule annotation

Interactioni

Subunit structurei

Hexamer; each subunit is composed of an acidic and a basic chain derived from a single precursor and linked by a disulfide bond.UniRule annotation

Protein-protein interaction databases

STRINGi3847.GLYMA13G18450.2.

Structurei

3D structure databases

ProteinModelPortaliP93708.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 249Cupin_1InterPro annotationAdd BLAST212
Domaini357 – 503Cupin_1InterPro annotationAdd BLAST147

Sequence similaritiesi

Belongs to the 11S seed storage protein (globulins) family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.

Family and domain databases

Gene3Di2.60.120.10. 3 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 3 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P93708-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKPFFTLSL SSLCLLLLSS ACFAITSSKF NECQLNNLNA LEPDHRVESE
60 70 80 90 100
GGLIETWNSQ HPELQCAGVT VSKRTLNRNG SHLPSYSPYP QMIIVVQGKG
110 120 130 140 150
EIGFAFPGCP ETFEKPQQQS SRRGSRSQQQ LQDSHQKIRH FNEGDVLVIP
160 170 180 190 200
LGVPYWTYNT GDEPVVAISL LDTSNFNNQL DQNPRVFYLA GNPDIEHPET
210 220 230 240 250
MQQQQQQKSH GGRKQGQHQQ QEEEGGSVLS GFSKHFLAQS FNTNEDTAEK
260 270 280 290 300
LRSPDDERKQ IVTVEGGLSV ISPKWQEQED EDEDEDEEYE QTPSYPPRRP
310 320 330 340 350
SHGKHEDDED EDEEEDQPRP DHPPQRPSRP EQQEPRGRGC QTRNGVEENI
360 370 380 390 400
CTMKLHENIA RPSRADFYNP KAGRISTLNS LTLPALRQFG LSAQYVVLYR
410 420 430 440 450
NGIYSPHWNL NANSVIYVTR GKGRVRVVNC QGNAVFDGEL RRGQLLVVPQ
460 470 480 490 500
NFVVAEQGGE QGLEYVVFKT HHNAVSSYIK DVFRAIPSEV LSNSYNLGQS
510
QVRQLKYQGN SGPLVNP
Length:517
Mass (Da):58,235
Last modified:May 1, 1997 - v1
Checksum:iDA25C13F05AA2741
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB000169 mRNA. Translation: BAA19059.1.
PIRiPQ0200.
PQ0806.
PQ0807.
PQ0808.
UniGeneiGma.30723.
Gma.32300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB000169 mRNA. Translation: BAA19059.1.
PIRiPQ0200.
PQ0806.
PQ0807.
PQ0808.
UniGeneiGma.30723.
Gma.32300.

3D structure databases

ProteinModelPortaliP93708.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA13G18450.2.

Protein family/group databases

Allergomei5821. Gly m 6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.

Family and domain databases

Gene3Di2.60.120.10. 3 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 3 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP93708_SOYBN
AccessioniPrimary (citable) accession number: P93708
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: October 5, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.