P93680 (P93680_PERAE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endochitinase EMBL CAB01591.1
EC=3.2.1.14 EMBL CAB01591.1

Gene names

Name:

chi1 EMBL CAB01591.1

Organism

Persea americana (Avocado) EMBL CAB01591.1

Taxonomic identifier

3435 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › magnoliids › Laurales › Lauraceae › Persea

Protein attributes

Sequence length	326 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410

Ontologies

Keywords
Domain	Signal EMBL CAB01591.1
Ligand	Chitin-binding RuleBase RU000410 SAAS SAAS001002
Molecular function	Glycosidase EMBL CAB01591.1 Hydrolase
PTM	Disulfide bond SAAS SAAS001002
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	chitin binding Inferred from electronic annotation. Source: UniProtKB-KW chitinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 25	25	Potential EMBL CAB01591.1
	Chain	26 – 326	301	endochitinase EMBL CAB01591.1		PRO_5000147714

Sequences

	Sequence		Length	Mass (Da)
	P93680 [UniParc]. Last modified August 1, 1998. Version 2. Checksum: 643B20589E062E61	FASTA	326	34,586
	10 20 30 40 50 60 MVYCTASLPL LLLLLVGLLA GEAFAEQCGR QAGGALCPGG LCCSQFGWCG STSDYCGPTC 70 80 90 100 110 120 QSQCGGVTPS PGGGVASLIS QSVFNQMLKH RNDAACQAKG FYTYNAFIAA ANSFNGFASV 130 140 150 160 170 180 GDTATRKREI AAFLAQTSHE TTGGWATAPD GPYAWGYCFL KEQGNPPDYC VPTAQWPCAP 190 200 210 220 230 240 GKKYYGRGPI QISYNYNYGP AGRAIGYDLI NNPDAVATDP VISFKTALWF WMTPQSPKPS 250 260 270 280 290 300 CHNVITGRWT PSAADRAAGR LPGYGVITNI INGGIECGKG FNDKVADRIG FYKRYCDLLG 310 320 VSYGSNLDCY NQRSFGVSTN PLAASS

References

[1]

"Identification and cloning of prs a 1, a 32-kDa endochitinase and major allergen of avocado, and its expression in the yeast Pichia pastoris." Sowka S., Hsieh L.S., Krebitz M., Akasawa A., Martin B.M., Starrett D., Peterbauer C.K., Scheiner O., Breiteneder H. J. Biol. Chem. 273:28091-28097(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Mesocarp EMBL CAB01591.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z78202 mRNA. Translation: CAB01591.1.
3D structure databases
HSSP	HSSP built from PDB template 1Q9B based on UniProtKB P02877.
ProteinModelPortal	P93680.
SMR	P93680. Positions 26-315.
ModBase	Search...
Protein family/group databases
Allergome	3414. Pers a 1.0101. 546. Pers a 1.
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	3.30.60.10. 1 hit.
InterPro	IPR001002. Chitin-bd_1. IPR018371. Chitin-binding_1_CS. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. IPR023346. Lysozyme-like_dom. [Graphical view]
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_bd_1. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
SUPFAM	SSF57016. Chitin_bd_1. 1 hit. SSF53955. SSF53955. 1 hit.
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. PS00774. CHITINASE_19_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

P93680_PERAE

Accession

Primary (citable) accession number: P93680

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	August 1, 1998
Last modified:	April 3, 2013
This is version 63 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)