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Protein
Submitted name:

Chaperonin-60 beta subunit

Gene
N/A
Organism
Solanum tuberosum (Potato)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Chaperonin-60 beta subunitImported
OrganismiSolanum tuberosum (Potato)Imported
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum

Subcellular locationi

Expressioni

Gene expression databases

ExpressionAtlasiP93570. baseline.

Structurei

3D structure databases

ProteinModelPortaliP93570.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili178 – 198Sequence analysisAdd BLAST21
Coiled coili399 – 419Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the chaperonin (HSP60) family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0356. Eukaryota.
COG0459. LUCA.
KOiK04077.

Family and domain databases

CDDicd03344. GroEL. 1 hit.
Gene3Di1.10.560.10. 2 hits.
3.50.7.10. 1 hit.
HAMAPiMF_00600. CH60. 1 hit.
InterProiView protein in InterPro
IPR018370. Chaperonin_Cpn60_CS.
IPR001844. Chaprnin_Cpn60.
IPR002423. Cpn60/TCP-1.
IPR037290. Cpn60/TCP-1_sf.
IPR027409. GroEL-like_apical_dom_sf.
IPR027413. GROEL-like_equatorial_sf.
PANTHERiPTHR11353. PTHR11353. 1 hit.
PfamiView protein in Pfam
PF00118. Cpn60_TCP1. 1 hit.
PRINTSiPR00298. CHAPERONIN60.
SUPFAMiSSF48592. SSF48592. 2 hits.
SSF52029. SSF52029. 1 hit.
SSF54849. SSF54849. 1 hit.
TIGRFAMsiTIGR02348. GroEL. 1 hit.
PROSITEiView protein in PROSITE
PS00296. CHAPERONINS_CPN60. 1 hit.

Sequencei

Sequence statusi: Complete.

P93570-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASTFAGMSS AGPLAAPSTS SNKLSSVANI SSTSFGSKRN VALRKSRRPT
60 70 80 90 100
ILAAAKELHF NKDGSAIKKL QNGVNKLADL VGVTLGPKGR NVVLESKYGA
110 120 130 140 150
PKIVNDGVTV AREVELEDPV ENIGAKLVRQ AAAKTNDLAG DGTTTSVVLA
160 170 180 190 200
QGLIAEGVKV VAAGANPVLI TRGIEKTAKA LVAELKNMSK EVEDSELADV
210 220 230 240 250
AAVSAGNNLE VGSMIAEAMS KVGRKGVVTL EEGKSAENSL RVVEGMQFDR
260 270 280 290 300
GYVSPYFVTD SEKMSVEYEN CKLLLVDKKI TNARDLVNVL EDAIRNGYPI
310 320 330 340 350
LIIAEDIEQE ALATLVVNKL RGALKVAALK APGFGERKSQ YLDDIATLTG
360 370 380 390 400
GTVIREELGL TLDKADKEVL GHAAKVVLTK DATTIVGDGS TQEAVNKRVA
410 420 430 440 450
QIKNLIEAAD QDYEKEKLNE RIAKLSGGVA VIQVGAQTET ELKEKKLRVE
460 470 480 490 500
DALNATKAAV EEGIVVGGGC TLLRLAAKVD AIKGTLANDE EKVGADIVKR
510 520 530 540 550
ALSYPLKLIA KNAGVNGSVV SEKVLSSDDP KFGYNAATGN YEDLMAAGII
560 570 580 590
DPTKVVRCCL EHAASVAKTF LMSDCVVVEI KEPEAAVAGN PMDNSGYGY
Length:599
Mass (Da):63,020
Last modified:May 1, 1997 - v1
Checksum:i929DB82798C7DE6C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U46136 mRNA. Translation: AAB39827.1.
PIRiT07733.
RefSeqiNP_001275097.1. NM_001288168.1.
UniGeneiStu.18023.

Genome annotation databases

GeneIDi102577525.
KEGGisot:102577525.

Similar proteinsi

Entry informationi

Entry nameiP93570_SOLTU
AccessioniPrimary (citable) accession number: P93570
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: December 20, 2017
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)