Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Soluble starch synthase 1, chloroplastic/amyloplastic

Gene
N/A
Organism
Solanum tuberosum (Potato)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Plays a minor role in starch synthesis in storage organs (tubers), but may contribute to the deposition of transient starch in chloroplasts of leaves.

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).

Pathway: starch biosynthesis

This protein is involved in the pathway starch biosynthesis, which is part of Glycan biosynthesis.
View all proteins of this organism that are known to be involved in the pathway starch biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei145 – 1451ADP-glucoseBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Starch biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00152.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Soluble starch synthase 1, chloroplastic/amyloplastic (EC:2.4.1.21)
Alternative name(s):
Soluble starch synthase I
Short name:
SS I
OrganismiSolanum tuberosum (Potato)
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
ProteomesiUP000011115 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Amyloplast, Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 641Soluble starch synthase 1, chloroplastic/amyloplasticPRO_0000011142
Transit peptidei1 – ?ChloroplastSequence Analysis

Expressioni

Tissue specificityi

High expression in leaves and very low in tubers.

Inductioni

Constant expression in light and darkness.

Interactioni

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400047731.

Structurei

3D structure databases

ProteinModelPortaliP93568.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

KOiK00703.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P93568-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSLQTPTNL SNKSCLCVSG RVVKGLRVER QVGLGFSWLL KGRRNRKVQS
60 70 80 90 100
LCVTSSVSDG SSIAENKNVS EGLLLGAERD GSGSVVGFQL IPHSVAGDAT
110 120 130 140 150
MVESHDIVAN DRDDLSEDTE EMEETPIKLT FNIIFVTAEA APYSKTGGLG
160 170 180 190 200
DVCGSLPMAL AARGHRVMVV SPRYLNGGPS DEKYANAVDL DVRATVHCFG
210 220 230 240 250
DAQEVAFYHE YRAGVDWVFV DHSSYCRPGT PYGDIYGAFG DNQFRFTLLS
260 270 280 290 300
HAACEAPLVL PLGGFTYGEK CLFLANDWHA ALVPLLLAAK YRPYGVYKDA
310 320 330 340 350
RSIVAIHNIA HQGVEPAVTY NNLGLPPQWY GAVEWIFPTW ARAHALDTGE
360 370 380 390 400
TVNVLKGAIA VADRILTVSQ GYSWEITTPE GGYGLHELLS SRQSVLNGIT
410 420 430 440 450
NGIDVNDWNP STDEHIASHY SINDLSGKVQ CKTDLQKELG LPIRPDCPLI
460 470 480 490 500
GFIGRLDYQK GVDIILSAIP ELMQNDVQVV MLGSGEKQYE DWMRHTENLF
510 520 530 540 550
KDKFRAWVGF NVPVSHRITA GCDILLMPSR FEPCGLNQLY AMRYGTIPIV
560 570 580 590 600
HSTGGLRDTV KDFNPYAQEG IGEGTGWTFS PLTSEKLLDT LKLAIGTYTE
610 620 630 640
HKSSWEGLMR RGMGRDYSWE NAAIQYEQVF TWAFIDPPYV R
Length:641
Mass (Da):70,608
Last modified:May 1, 1997 - v1
Checksum:i30F8B0546CEFB74C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y10416 mRNA. Translation: CAA71442.1.
PIRiT07668.
RefSeqiNP_001275074.1. NM_001288145.1.
UniGeneiStu.202.

Genome annotation databases

GeneIDi102600045.
KEGGisot:102600045.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y10416 mRNA. Translation: CAA71442.1.
PIRiT07668.
RefSeqiNP_001275074.1. NM_001288145.1.
UniGeneiStu.202.

3D structure databases

ProteinModelPortaliP93568.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400047731.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102600045.
KEGGisot:102600045.

Phylogenomic databases

KOiK00703.

Enzyme and pathway databases

UniPathwayiUPA00152.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Cloning and functional analysis of a cDNA encoding a starch synthase from potato (Solanum tuberosum L.) that is predominantly expressed in leaf tissue."
    Kossmann J., Abel G.J.W., Springer F., Lloyd J.R., Willmitzer L.
    Planta 208:503-511(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Desiree.
    Tissue: Leaf.

Entry informationi

Entry nameiSSY1_SOLTU
AccessioniPrimary (citable) accession number: P93568
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: May 1, 1997
Last modified: June 24, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.