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Protein

Class-10 pathogenesis-related protein 1

Gene

PR10-1

Organism
Medicago truncatula (Barrel medic) (Medicago tribuloides)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Pathogenesis-related protein

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Class-10 pathogenesis-related protein 1
Short name:
MtPR10-1
Alternative name(s):
Pathogenesis-related PR10-like protein 1
Gene namesi
Name:PR10-1
Ordered Locus Names:MTR_2g035100
OrganismiMedicago truncatula (Barrel medic) (Medicago tribuloides)
Taxonomic identifieri3880 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaeTrifolieaeMedicago
Proteomesi
  • UP000002051 Componentsi: Chromosome 2, Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 157157Class-10 pathogenesis-related protein 1PRO_0000429364Add
BLAST

Expressioni

Tissue specificityi

Expressed in roots. Detected in nodules and leaves, but not in stems and flowers.1 Publication

Inductioni

Not induced during nodulation. Up-regulated upon pathogen infection.1 Publication

Structurei

3D structure databases

ProteinModelPortaliP93333.
SMRiP93333. Positions 2-157.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi87 – 904Poly-Gly

Sequence similaritiesi

Belongs to the BetVI family.Curated

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR000916. Bet_v_I/MLP.
IPR024949. Bet_v_I_allergen.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSiPR00634. BETALLERGEN.
PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P93333-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVFNFEDET TSIVAPARLY KALVTDSDNL IPKVIDAIQS IEIVEGNGGA
60 70 80 90 100
GTIKKLTFVE GGETKYDLHK VDLVDDVNFA YNYSIVGGGG LPDTVEKISF
110 120 130 140 150
ESKLSAGPDG GSIAKLTVKY FTKGDAAPSE EEIKGGKARG DGLFKALEGY

VLANPDY
Length:157
Mass (Da):16,657
Last modified:May 1, 1997 - v1
Checksum:i635E986EEB366345
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08641 mRNA. Translation: CAA69931.1.
CM001218 Genomic DNA. Translation: AES65080.1.
BT147465 mRNA. Translation: AFK47259.1.
BT148546 mRNA. Translation: AFK48340.1.
RefSeqiXP_003594829.1. XM_003594781.2.
UniGeneiMtr.6628.

Genome annotation databases

EnsemblPlantsiAES65080; AES65080; MTR_2g035100.
GeneIDi11416844.
GrameneiAES65080; AES65080; MTR_2g035100.
KEGGimtr:MTR_2g035100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08641 mRNA. Translation: CAA69931.1.
CM001218 Genomic DNA. Translation: AES65080.1.
BT147465 mRNA. Translation: AFK47259.1.
BT148546 mRNA. Translation: AFK48340.1.
RefSeqiXP_003594829.1. XM_003594781.2.
UniGeneiMtr.6628.

3D structure databases

ProteinModelPortaliP93333.
SMRiP93333. Positions 2-157.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAES65080; AES65080; MTR_2g035100.
GeneIDi11416844.
GrameneiAES65080; AES65080; MTR_2g035100.
KEGGimtr:MTR_2g035100.

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR000916. Bet_v_I/MLP.
IPR024949. Bet_v_I_allergen.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSiPR00634. BETALLERGEN.
PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPR101_MEDTR
AccessioniPrimary (citable) accession number: P93333
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 11, 2014
Last sequence update: May 1, 1997
Last modified: June 8, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.