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Protein
Submitted name:

SCOF-1

Gene

scof-1

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SCOF-1Imported
Gene namesi
Name:scof-1Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

Interactioni

Protein-protein interaction databases

STRINGi3847.GLYMA17G35430.1.

Structurei

3D structure databases

ProteinModelPortaliP93166.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini85 – 107C2H2-typeInterPro annotationAdd BLAST23
Domaini138 – 160C2H2-typeInterPro annotationAdd BLAST23

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF13912. zf-C2H2_6. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P93166-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALEALNSPT TTAPSFPFDD PTIPWAKRKR SKRSRDHPSE EEYLALCLIM
60 70 80 90 100
LARGGTTTVN NRHVSPPPLQ PQPQPTPDPS TKLSYKCSVC DKSFPSYQAL
110 120 130 140 150
GGHKASHRKL AGAAEDQPPS TTTSSAAATS SASGGKAHEC SICHKSFPTG
160 170 180 190 200
QALGGHKRCH YEGNGNGNNN NSNSVVTVAS EGVGSTHTVS HGHHRDFDLN
210 220 230 240
IPAFPDFSTK VGEDEVESPH PVMKKPRLFV IPKIEIPQFQ
Length:240
Mass (Da):25,814
Last modified:May 1, 1997 - v1
Checksum:i807023E657136D20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U68763 mRNA. Translation: AAB39638.1.
PIRiT09602.
RefSeqiNP_001235613.1. NM_001248684.1.
UniGeneiGma.31854.

Genome annotation databases

GeneIDi547886.
KEGGigmx:547886.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U68763 mRNA. Translation: AAB39638.1.
PIRiT09602.
RefSeqiNP_001235613.1. NM_001248684.1.
UniGeneiGma.31854.

3D structure databases

ProteinModelPortaliP93166.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA17G35430.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi547886.
KEGGigmx:547886.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF13912. zf-C2H2_6. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP93166_SOYBN
AccessioniPrimary (citable) accession number: P93166
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: October 5, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.