Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Germin-like protein subfamily 2 member 3

Gene

GLP8

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi109ManganeseBy similarity1
Metal bindingi111ManganeseBy similarity1
Metal bindingi116ManganeseBy similarity1
Metal bindingi155ManganeseBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandManganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Germin-like protein subfamily 2 member 3
Gene namesi
Name:GLP8
Ordered Locus Names:At3g05930
ORF Names:F10A16.23, F2O10.11
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G05930
TAIRilocus:2074489 AT3G05930

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000001082323 – 219Germin-like protein subfamily 2 member 3Add BLAST197

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi31 ↔ 46By similarity
Glycosylationi70N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiP93000

Expressioni

Gene expression databases

ExpressionAtlasiP93000 baseline and differential
GenevisibleiP93000 AT

Interactioni

Subunit structurei

Oligomer (believed to be a pentamer but probably hexamer).By similarity

Protein-protein interaction databases

STRINGi3702.AT3G05930.1

Structurei

3D structure databases

ProteinModelPortaliP93000
SMRiP93000
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the germin family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IJHX Eukaryota
ENOG4111RMA LUCA
HOGENOMiHOG000235000
InParanoidiP93000
OMAiAHMAIAD
OrthoDBiEOG09360LVG
PhylomeDBiP93000

Family and domain databases

Gene3Di2.60.120.10, 1 hit
InterProiView protein in InterPro
IPR006045 Cupin_1
IPR001929 Germin
IPR014710 RmlC-like_jellyroll
IPR011051 RmlC_Cupin_sf
PfamiView protein in Pfam
PF00190 Cupin_1, 1 hit
PRINTSiPR00325 GERMIN
SMARTiView protein in SMART
SM00835 Cupin_1, 1 hit
SUPFAMiSSF51182 SSF51182, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P93000-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA
60 70 80 90 100
KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
110 120 130 140 150
APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP
160 170 180 190 200
KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
210
FGAAAPEIQK IKGKFPPKK
Length:219
Mass (Da):23,033
Last modified:May 1, 1997 - v1
Checksum:iD344858985178CFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U75207 mRNA Translation: AAB51585.1
AC012393 Genomic DNA Translation: AAF26095.1
AC013454 Genomic DNA Translation: AAF23223.1
CP002686 Genomic DNA Translation: AEE74317.1
RefSeqiNP_187244.1, NM_111467.3
UniGeneiAt.23312
At.49606

Genome annotation databases

EnsemblPlantsiAT3G05930.1; AT3G05930.1; AT3G05930
GeneIDi819762
GrameneiAT3G05930.1; AT3G05930.1; AT3G05930
KEGGiath:AT3G05930

Similar proteinsi

Entry informationi

Entry nameiGL23_ARATH
AccessioniPrimary (citable) accession number: P93000
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 29, 2001
Last sequence update: May 1, 1997
Last modified: May 23, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health