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Protein

Germin-like protein subfamily T member 1

Gene

GLP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi112ManganeseBy similarity1
Metal bindingi114ManganeseBy similarity1
Metal bindingi119ManganeseBy similarity1
Metal bindingi158ManganeseBy similarity1

GO - Molecular functioni

Keywordsi

LigandManganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Germin-like protein subfamily T member 1
Gene namesi
Name:GLP1
Synonyms:GLP4
Ordered Locus Names:At1g18970
ORF Names:F14D16.12, F14D16_7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G18970
TAIRilocus:2011291 AT1G18970

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_000001083028 – 220Germin-like protein subfamily T member 1Add BLAST193

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi19 ↔ 37By similarity
Glycosylationi136N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiP92995
PRIDEiP92995

Expressioni

Gene expression databases

ExpressionAtlasiP92995 baseline and differential
GenevisibleiP92995 AT

Interactioni

Subunit structurei

Oligomer (believed to be a pentamer but probably hexamer).By similarity

Protein-protein interaction databases

STRINGi3702.AT1G18970.1

Structurei

3D structure databases

ProteinModelPortaliP92995
SMRiP92995
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the germin family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IW0A Eukaryota
ENOG410YKM8 LUCA
HOGENOMiHOG000235000
InParanoidiP92995
OMAiMITAFNS
OrthoDBiEOG09360L14
PhylomeDBiP92995

Family and domain databases

Gene3Di2.60.120.10, 1 hit
InterProiView protein in InterPro
IPR006045 Cupin_1
IPR001929 Germin
IPR019780 Germin_Mn-BS
IPR014710 RmlC-like_jellyroll
IPR011051 RmlC_Cupin_sf
PfamiView protein in Pfam
PF00190 Cupin_1, 1 hit
PRINTSiPR00325 GERMIN
SMARTiView protein in SMART
SM00835 Cupin_1, 1 hit
SUPFAMiSSF51182 SSF51182, 1 hit
PROSITEiView protein in PROSITE
PS00725 GERMIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P92995-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF
60 70 80 90 100
PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
110 120 130 140 150
VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF
160 170 180 190 200
VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
210 220
TRAFRTDDTT VQNLKSKFAV
Length:220
Mass (Da):23,214
Last modified:August 29, 2001 - v2
Checksum:i0F60BFFECBD24098
GO

Sequence cautioni

The sequence AAB51565 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC068602 Genomic DNA Translation: AAF79304.1
CP002684 Genomic DNA Translation: AEE29785.1
U75187 mRNA Translation: AAB51565.1 Different initiation.
BT024837 mRNA Translation: ABD60720.1
RefSeqiNP_564067.2, NM_101754.3
UniGeneiAt.11327

Genome annotation databases

EnsemblPlantsiAT1G18970.1; AT1G18970.1; AT1G18970
GeneIDi838478
GrameneiAT1G18970.1; AT1G18970.1; AT1G18970
KEGGiath:AT1G18970

Similar proteinsi

Entry informationi

Entry nameiGLT1_ARATH
AccessioniPrimary (citable) accession number: P92995
Secondary accession number(s): Q29PR9, Q9LMD0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 29, 2001
Last sequence update: August 29, 2001
Last modified: April 25, 2018
This is version 116 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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