Unreviewed, UniProtKB/TrEMBL P92948 (P92948_ARATH)

Names and origin

Protein names

Submitted name:
    Myb-like DNA binding protein EMBL BAA09598.1

Gene names

Name:

AtCDC5 EMBL BAA09598.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL BAA09598.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	844 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Cellular component	Nucleus Spearmint SPM001005
Domain	Repeat Spearmint SPM001005
Ligand	DNA-binding Spearmint SPM001005
Gene Ontology (GO)
Biological process	regulation of transcription Inferred from electronic annotation. Source: InterPro
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
MOS4	Q949S9	1	EBI-1382948,EBI-1382943
PRL1	Q42384	1	EBI-1382948,EBI-1382964

Sequences

	Sequence		Length	Mass (Da)
	P92948-1 [UniParc]. Last modified May 1, 1997. Version 1. Checksum: 52F36371A7E7255C	FASTA	844	95,757
	10 20 30 40 50 60 MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 70 80 90 100 110 120 EWTREEDEKL LHLAKLLPTQ WRTIAPIVGR TPSQCLERYE KLLDAACTKD ENYDAADDPR 130 140 150 160 170 180 KLRPGEIDPN PEAKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 190 200 210 220 230 240 LASLQKRREL KAAGIDGRHR KRKRKGIDYN AEIPFEKRAP AGFYDTADED RPADQVKFPT 250 260 270 280 290 300 TIEELEGKRR ADVEAHLRKQ DVARNKIAQR QDAPAAILQA NKLNDPEVVR KRSKLMLPPP 310 320 330 340 350 360 QISDHELEEI AKMGYASDLL AENEELTEGS AATRALLANY SQTPRQGMTP MRTPQRTPAG 370 380 390 400 410 420 KGDAIMMEAE NLARLRDSQT PLLGGENPEL HPSDFTGVTP RKKEIQTPNP MLTPSMTPGG 430 440 450 460 470 480 AGLTPRIGLT PSRDGSSFSM TPKGTPFRDE LHINEDMDMQ QSAKLERQRR EEARRSLRSG 490 500 510 520 530 540 LTGLPQPKNE YQIVAQPPPE ESEEPEEKIE EDMSDRIARE KAEEEARQQA LLKKRSKVLQ 550 560 570 580 590 600 RDLPRPPAAS LAVIRNSLLS ADGDKSSVVP PTPIEVADKM VREELLQLLE HDNAKYPLDD 610 620 630 640 650 660 KAEKKKGAKN RTNRSASQVL AIDDFDENEL QEADKMIKEE GKFLCVSMGH ENKTLDDFVE 670 680 690 700 710 720 AHNTCVNDLM YFPTRSAYEL SSVAGNADKV AAFQEEMENV RKKMEEDEKK AEHMKAKYKT 730 740 750 760 770 780 YTKGHERRAE TVWTQIEATL KQAEIGGTEV ECFKALKRQE EMAASFRKKN LQEEVIKQKE 790 800 810 820 830 840 TESKLQTRYG NMLAMVEKAE EIMVGFRAQA LKKQEDVEDS HKLKEAKLAT GEEEDIAIAM EASA

References

[1]	"A cdc5+ homolog of a higher plant, Arabidopsis thaliana." Hirayama T., Shinozaki K. Proc. Natl. Acad. Sci. U.S.A. 93:13371-13376(1996) [PubMed: 8917598] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Whole plant EMBL BAA09598.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	D58424 mRNA. Translation: BAA09598.1.
IPI	IPI00542991.
3D structure databases
HSSP	HSSP built from PDB template 1MSE based on UniProtKB P06876.
SMR	P92948. Positions 9-63.
ModBase	Search...
Protein-protein interaction databases
IntAct	P92948. 2 interactions.
Family and domain databases
InterPro	IPR012287. Homeodomain-rel. IPR017930. Myb-type_HTH. IPR014778. Myb_DNA-bd. IPR015495. Myb_trans_fac. IPR001005. SANT_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.60. Homeodomain-rel. 2 hits.
PANTHER	PTHR10641. Myb_transfac. 1 hit.
Pfam	PF00249. Myb_DNA-binding. 2 hits. [Graphical view]
SMART	SM00717. SANT. 2 hits. [Graphical view]
PROSITE	PS51294. HTH_MYB. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

P92948_ARATH

Accession

Primary (citable) accession number: P92948

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	May 5, 2009
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)