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Protein
Submitted name:

CaLB protein

Gene
N/A
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processLipid transportSAAS annotation, Transport
LigandLipid-bindingSAAS annotation

Enzyme and pathway databases

ReactomeiR-ATH-1660662 Glycosphingolipid metabolism

Names & Taxonomyi

Protein namesi
Submitted name:
CaLB proteinImported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Subcellular locationi

    Keywords - Cellular componenti

    Membrane

    Expressioni

    Gene expression databases

    ExpressionAtlasiP92940 baseline and differential

    Structurei

    3D structure databases

    ProteinModelPortaliP92940
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Domaini49 – 231SMP-LTDInterPro annotationAdd BLAST183
    Domaini233 – 329C2InterPro annotationAdd BLAST97

    Coiled coil

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Coiled coili373 – 400Sequence analysisAdd BLAST28

    Keywords - Domaini

    Coiled coilSequence analysis, TransmembraneSAAS annotation

    Phylogenomic databases

    eggNOGiKOG1012 Eukaryota
    COG5038 LUCA

    Family and domain databases

    Gene3Di2.60.40.150, 1 hit
    InterProiView protein in InterPro
    IPR000008 C2_dom
    IPR035892 C2_domain_sf
    IPR031069 CLB_plant
    IPR031468 SMP_LBD
    PANTHERiPTHR10774:SF51 PTHR10774:SF51, 1 hit
    PfamiView protein in Pfam
    PF00168 C2, 1 hit
    PF17047 SMP_LBD, 1 hit
    PRINTSiPR00360 C2DOMAIN
    SMARTiView protein in SMART
    SM00239 C2, 1 hit
    PROSITEiView protein in PROSITE
    PS50004 C2, 1 hit
    PS51847 SMP, 1 hit

    Sequencei

    Sequence statusi: Complete.

    P92940-1 [UniParc]FASTAAdd to basket

    « Hide

            10         20         30         40         50
    MAGWSRMMTH RSSKRVAKAV DMKLLGSLSR DDLKKICGDN FPQWISFPAF
    60 70 80 90 100
    EQVKWLNKLL SKMWPYIAEA ATMVIRDSVE PLLEDYRPPG ITSLKFSKLT
    110 120 130 140 150
    SGNVAPKIEG IRVQSFKEGQ VTMDVDLRWG GDPNIVLGVT ALVASIPIQL
    160 170 180 190 200
    KDLQVFTVAR VIFQLADEIP CISAVVVALL AEPKPRIDYT LKAVGGSLTA
    210 220 230 240 250
    IPGLSDMIDD TVDTIVKDML QWPHRIVFPI GGIPVDLSDL ELKPQGKLIV
    260 270 280 290 300
    TVVKATNLKN KELIGKSDPY ATIYIRPVFK YKTNAIDNNL NPVWDQTFEL
    310 320 330 340 350
    IAEDKETQSL TVEVFDKDVG QDERLGLVKL PLSSLEAGVT KELELNLLSS
    360 370 380 390 400
    LDTLKVKDKK DRGSITLKVH YHEFNKEEQM AALEDEKKIM EERKRLKEAG
    410 420 430 440 450
    VIGSTMDAVG MVGSGLGAGV GMVGTGIGTG VGLVGSGVSS GVGMVGSGFG
    460 470 480 490
    AVGSGLSKAG RFMGRTITGQ SSKRSGSSTP VNTVPENDGA KQQ
    Length:493
    Mass (Da):53,386
    Last modified:May 1, 1997 - v1
    Checksum:i4941658ACF8BA36A
    GO

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    X96598 mRNA Translation: CAA65416.1

    Similar proteinsi

    Entry informationi

    Entry nameiP92940_ARATH
    AccessioniPrimary (citable) accession number: P92940
    Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1997
    Last sequence update: May 1, 1997
    Last modified: May 23, 2018
    This is version 81 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

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