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P92919

- CB23_APIGR

UniProt

P92919 - CB23_APIGR

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Protein
Chlorophyll a-b binding protein, chloroplastic
Gene
LHC0
Organism
Apium graveolens (Celery)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.

Cofactori

Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi56 – 561Magnesium (chlorophyll-b 1 axial ligand); via carbonyl oxygen By similarity
Binding sitei78 – 781Chlorophyll-a 1; via amide nitrogen By similarity
Binding sitei84 – 841Chlorophyll-a 1 By similarity
Metal bindingi97 – 971Magnesium (chlorophyll-a 1 axial ligand) By similarity
Metal bindingi100 – 1001Magnesium (chlorophyll-a 2 axial ligand) By similarity
Binding sitei102 – 1021Chlorophyll-b 2 By similarity
Binding sitei135 – 1351Chlorophyll-a 3 By similarity
Binding sitei145 – 1451Chlorophyll-a 3; via amide nitrogen By similarity
Metal bindingi151 – 1511Magnesium (chlorophyll-b 2 axial ligand); via carbonyl oxygen By similarity
Binding sitei155 – 1551Chlorophyll-b 3 By similarity
Binding sitei163 – 1631Chlorophyll-b 4 or chlorophyll-b 5 By similarity
Metal bindingi171 – 1711Magnesium (chlorophyll-b 3 axial ligand) By similarity
Binding sitei174 – 1741Chlorophyll-b 4 By similarity
Binding sitei180 – 1801Chlorophyll-b 2; via amide nitrogen By similarity
Binding sitei211 – 2111Chlorophyll-a 5 By similarity
Metal bindingi212 – 2121Magnesium (chlorophyll-a 3 axial ligand) By similarity
Metal bindingi215 – 2151Magnesium (chlorophyll-a 4 axial ligand) By similarity
Binding sitei217 – 2171Chlorophyll-a 1 By similarity
Metal bindingi229 – 2291Magnesium (chlorophyll-a 5 axial ligand) By similarity
Metal bindingi244 – 2441Magnesium (chlorophyll-a 6 axial ligand) By similarity
Binding sitei253 – 2531Chlorophyll-a 6; via amide nitrogen By similarity
Binding sitei260 – 2601Chlorophyll-b 5; via carbonyl oxygen By similarity

GO - Molecular functioni

  1. chlorophyll binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. photosynthesis, light harvesting Source: InterPro
  2. protein-chromophore linkage Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Photosynthesis

Keywords - Ligandi

Chlorophyll, Chromophore, Magnesium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chlorophyll a-b binding protein, chloroplastic
Alternative name(s):
Allergen: Api g 3
Gene namesi
Name:LHC0
OrganismiApium graveolens (Celery)
Taxonomic identifieri4045 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsApialesApiaceaeApioideaeapioid supercladeApieaeApium

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei98 – 11821Helical; Reviewed prediction
Add
BLAST
Transmembranei150 – 17021Helical; Reviewed prediction
Add
BLAST
Transmembranei218 – 23821Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. chloroplast thylakoid membrane Source: UniProtKB-SubCell
  2. integral component of membrane Source: UniProtKB-KW
  3. photosystem I Source: UniProtKB-KW
  4. photosystem II Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Membrane, Photosystem I, Photosystem II, Plastid, Thylakoid

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human.

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei3086. Api g 3.0101.
774. Api g 3.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 3535Chloroplast Reviewed prediction
Add
BLAST
Chaini36 – 264229Chlorophyll a-b binding protein, chloroplastic
PRO_0000003646Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei36 – 361N2-acetylarginine By similarity
Modified residuei38 – 381Phosphothreonine By similarity

Post-translational modificationi

Photoregulated by reversible phosphorylation of its threonine residues By similarity.

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PRIDEiP92919.

Interactioni

Subunit structurei

The LHC complex consists of chlorophyll a-b binding proteins.

Structurei

3D structure databases

ProteinModelPortaliP92919.
SMRiP92919. Positions 46-264.

Family & Domainsi

Domaini

The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.

Sequence similaritiesi

Keywords - Domaini

Transit peptide, Transmembrane, Transmembrane helix

Family and domain databases

Gene3Di1.10.3460.10. 1 hit.
InterProiIPR001344. Chloro_AB-bd_pln.
IPR022796. Chloroa_b-bind.
IPR023329. Chlorophyll_a/b-bd_dom.
[Graphical view]
PANTHERiPTHR21649. PTHR21649. 1 hit.
PfamiPF00504. Chloroa_b-bind. 1 hit.
[Graphical view]
SUPFAMiSSF103511. SSF103511. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P92919-1 [UniParc]FASTAAdd to Basket

« Hide

MAASTMALSS PALAGKAVKV APSSSELFGN GRVSMRKTVK APVSDSPWYG    50
PDRVKYLGPF SGEAPSYLTG EFPGDYGWDT AGLSADPETF AKNRELEVIH 100
SRWAMLGALG CVFPELLARN GVKFGEAVWF KAGSQIFSEG GLDYLGNPSL 150
VHAQSILSIW ATQVILMGAV EGYRVAGGPL GEIVDPLYPG GSFDPLGLAE 200
DPERSAELKV KELKNGRLAM FSMFGFFVQA IVTGKGPLEN LADHLADPVN 250
NNAWAFATNF VPGK 264
Length:264
Mass (Da):28,076
Last modified:May 1, 1997 - v1
Checksum:i07126C7D5D86BA66
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z75663 mRNA. Translation: CAA99993.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z75663 mRNA. Translation: CAA99993.1 .

3D structure databases

ProteinModelPortali P92919.
SMRi P92919. Positions 46-264.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

Allergomei 3086. Api g 3.0101.
774. Api g 3.

Proteomic databases

PRIDEi P92919.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 1.10.3460.10. 1 hit.
InterProi IPR001344. Chloro_AB-bd_pln.
IPR022796. Chloroa_b-bind.
IPR023329. Chlorophyll_a/b-bd_dom.
[Graphical view ]
PANTHERi PTHR21649. PTHR21649. 1 hit.
Pfami PF00504. Chloroa_b-bind. 1 hit.
[Graphical view ]
SUPFAMi SSF103511. SSF103511. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Characterization of a chlorophyll ab binding protein from celery as a food allergen Api g 3."
    Hoffmann-Sommergruber K., Pec M., Ferris R., O'Riordain G., Ebner C., Scheiner O., Breiteneder H.
    Submitted (JUL-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Bulb.

Entry informationi

Entry nameiCB23_APIGR
AccessioniPrimary (citable) accession number: P92919
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: May 1, 1997
Last modified: February 19, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. Allergens
    Nomenclature of allergens and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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